RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 MXD3Q9BW11 206 aa11.87□□□□□ -0.51
MARK3-213ENST00000558611 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
MARK3-213ENST00000558611 AKAP11Q9UKA4 1901 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 AQP7O14520 342 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 ZEB2O60315 1214 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 NAT1P18440 290 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 FGFR2P21802 821 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
MARK3-213ENST00000558611 IL15P40933 162 aaPredicted RBP11.86□□□□□ -0.51
MARK3-213ENST00000558611 GYG1P46976 350 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 LHFPL2Q6ZUX7 228 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 USP7Q93009 1102 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
MARK3-213ENST00000558611 ACSS3Q9H6R3 686 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 PGAP2Q9UHJ9 254 aa11.86□□□□□ -0.51
MARK3-213ENST00000558611 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
MARK3-213ENST00000558611 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 E2F8A0AVK6 867 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 IFIT1P09914 478 aaKnown RBP11.85□□□□□ -0.51
MARK3-213ENST00000558611 BPIP17213 487 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
MARK3-213ENST00000558611 HTRA3P83110 453 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 ITKQ08881 620 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 CDCA2Q69YH5 1023 aaPredicted RBP11.85□□□□□ -0.51
MARK3-213ENST00000558611 CDH24Q86UP0 819 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 KIF18BQ86Y91 864 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 OR2W6PQ8NHA6 318 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
MARK3-213ENST00000558611 DCAF4Q8WV16 495 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 LPIN2Q92539 896 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
MARK3-213ENST00000558611 MYOZ2Q9NPC6 264 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 THSD7BQ9C0I4 1608 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
MARK3-213ENST00000558611 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 SASH1O94885 1247 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 SLITRK5O94991 958 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 SLC5A1P13866 664 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 MMP14P50281 582 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 FKBP1AP62942 108 aaKnown RBP11.84□□□□□ -0.51
MARK3-213ENST00000558611 AMPD2Q01433 879 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 MVPQ14764 893 aaKnown RBP11.84□□□□□ -0.51
MARK3-213ENST00000558611 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 CAVIN4Q5BKX8 364 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 GORABQ5T7V8 394 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 TMEM130Q8N3G9 435 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 CERS5Q8N5B7 392 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 PRDM14Q9GZV8 571 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
MARK3-213ENST00000558611 RAB27AP51159 221 aa11.83□□□□□ -0.52
MARK3-213ENST00000558611 ZCCHC8Q6NZY4 707 aaKnown RBP11.83□□□□□ -0.52
MARK3-213ENST00000558611 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.83□□□□□ -0.52
MARK3-213ENST00000558611 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
MARK3-213ENST00000558611 GLIS2Q9BZE0 524 aaPredicted RBP11.83□□□□□ -0.52
MARK3-213ENST00000558611 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
MARK3-213ENST00000558611 AK9Q5TCS8 1911 aa11.83□□□□□ -0.52
MARK3-213ENST00000558611 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
MARK3-213ENST00000558611 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
MARK3-213ENST00000558611 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 DOCK2Q92608 1830 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 OTOFQ9HC10 1997 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 TRAF5O00463 557 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 LCE2BO14633 110 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 AKAP10O43572 662 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 CRTAMO95727 393 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 SCGB1D2O95969 90 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 CELA2BP08218 269 aaPredicted RBP11.82□□□□□ -0.52
MARK3-213ENST00000558611 ITIH2P19823 946 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 GNALP38405 381 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 SCNN1BP51168 640 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 Q6ZNB5 142 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 USP53Q70EK8 1073 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 DNAJC5GQ8N7S2 189 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 WNK4Q96J92 1243 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 GGA3Q9NZ52 723 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 HDAC9Q9UKV0 1011 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 JAG2Q9Y219 1238 aa11.82□□□□□ -0.52
MARK3-213ENST00000558611 GPR55Q9Y2T6 319 aaPredicted RBP11.82□□□□□ -0.52
MARK3-213ENST00000558611 ASTN2O75129 1339 aaPredicted RBP11.82□□□□□ -0.52
MARK3-213ENST00000558611 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
MARK3-213ENST00000558611 CYP7A1P22680 504 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 ECI1P42126 302 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 TFCP2Q12800 502 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 LRRC41Q15345 812 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 MFSD14BQ5SR56 506 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 IRF7Q92985 503 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
MARK3-213ENST00000558611 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 TRIM11Q96F44 468 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
MARK3-213ENST00000558611 GFOD1Q9NXC2 390 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms