RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TECP42680 631 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 EPHA7Q15375 998 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 FAM160B1Q5W0V3 765 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 PRSS33Q8NF86 280 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 ZSCAN16Q9H4T2 348 aaPredicted RBP17.42■□□□□ 0.38
LINC01220-201ENST00000558575 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 WRAP73Q9P2S5 460 aaPredicted RBP17.42■□□□□ 0.38
LINC01220-201ENST00000558575 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 IGSF9BQ9UPX0 1349 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 POTEMA6NI47 508 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 SLITRK3O94933 977 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 BRD1O95696 1058 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 F13A1P00488 732 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 PDIA4P13667 645 aaKnown RBP17.41■□□□□ 0.38
LINC01220-201ENST00000558575 INSRRP14616 1297 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 SLC26A2P50443 739 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 ATP2C1P98194 919 aaPredicted RBP17.41■□□□□ 0.38
LINC01220-201ENST00000558575 PTPAQ15257 358 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 SF3A1Q15459 793 aaKnown RBP17.41■□□□□ 0.38
LINC01220-201ENST00000558575 PTGISQ16647 500 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 NCAPH2Q6IBW4 605 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 BANK1Q8NDB2 785 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 ATP8B4Q8TF62 1192 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 WNT8BQ93098 351 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 HSD17B14Q9BPX1 270 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
LINC01220-201ENST00000558575 C17orf102A2RUQ5 167 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 ZBTB42B2RXF5 422 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 H3BQ06 376 aaPredicted RBP17.4■□□□□ 0.38
LINC01220-201ENST00000558575 TREHO43280 583 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC01220-201ENST00000558575 ERVK-21P61565 698 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
LINC01220-201ENST00000558575 DEFB103AP81534 67 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 LMBR1Q8WVP7 490 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 TRAPPC12Q8WVT3 735 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 DHX38Q92620 1227 aaKnown RBP17.4■□□□□ 0.38
LINC01220-201ENST00000558575 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 EIF2AK1Q9BQI3 630 aaKnown RBP17.4■□□□□ 0.38
LINC01220-201ENST00000558575 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
LINC01220-201ENST00000558575 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.38
LINC01220-201ENST00000558575 LAD1O00515 517 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 HBP1O60381 514 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 BAIAP3O94812 1187 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.37
LINC01220-201ENST00000558575 SPATA31C1P0DKV0 1188 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 PRPHP41219 470 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 ZP2Q05996 745 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 PPFIA1Q13136 1202 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 GRIK4Q16099 956 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
LINC01220-201ENST00000558575 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
LINC01220-201ENST00000558575 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 NRCAMQ92823 1304 aa17.39■□□□□ 0.37
LINC01220-201ENST00000558575 MBLAC1A4D2B0 266 aaPredicted RBP17.38■□□□□ 0.37
LINC01220-201ENST00000558575 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 TMEM150BA6NC51 233 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 ZBTB39O15060 712 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 QARSP47897 775 aaKnown RBP17.38■□□□□ 0.37
LINC01220-201ENST00000558575 PSMC5P62195 406 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 GRIN1Q05586 938 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 CTTNQ14247 550 aaKnown RBP17.38■□□□□ 0.37
LINC01220-201ENST00000558575 PDIA5Q14554 519 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 GPNMBQ14956 572 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 SERINC5Q86VE9 423 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
LINC01220-201ENST00000558575 ATP6V0A1Q93050 837 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 TFIP11Q9UBB9 837 aaKnown RBP17.38■□□□□ 0.37
LINC01220-201ENST00000558575 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
LINC01220-201ENST00000558575 PTPRZ1P23471 2315 aaPredicted RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 RIF1Q5UIP0 2472 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 A0A087WWV3 80 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 PP2D1A8MPX8 630 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 MED24O75448 989 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 OATP04181 439 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CDC25AP30304 524 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 KCNJ6P48051 423 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 IGBP1P78318 339 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 PRKCEQ02156 737 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 TARBP2Q15633 366 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 ECM1Q16610 540 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 TCTN1Q2MV58 587 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 ARL6IP4Q66PJ3 421 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 DTHD1Q6ZMT9 781 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 RUFY4Q6ZNE9 571 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 ANO5Q75V66 913 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CATSPER3Q86XQ3 398 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 TGS1Q96RS0 853 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms