RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 MAGEC2Q9UBF1 373 aaPredicted RBP4.06□□□□□ -1.76
HERC1-203ENST00000558532 FTSJ1Q9UET6 329 aa4.06□□□□□ -1.76
HERC1-203ENST00000558532 RCAN3Q9UKA8 241 aa4.06□□□□□ -1.76
HERC1-203ENST00000558532 NESP48681 1621 aa4.06□□□□□ -1.76
HERC1-203ENST00000558532 DNMBPQ6XZF7 1577 aa4.06□□□□□ -1.76
HERC1-203ENST00000558532 ABCC2Q92887 1545 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 EIF3AQ14152 1382 aaKnown RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 USP47Q96K76 1375 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 USP19O94966 1318 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 MYBBP1AQ9BQG0 1328 aaKnown RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 CBX4O00257 560 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 FOXD2O60548 495 aaPredicted RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 FRAT2O75474 233 aaPredicted RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 CYP1A1P04798 512 aaPredicted RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 TPM2P07951 284 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 JMJD7P0C870 316 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 TERF1P54274 439 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 IL13RA1P78552 427 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 RALBP1Q15311 655 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 STILQ15468 1287 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 NBPF8Q3BBV2 869 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 PIK3R6Q5UE93 754 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 CREB3L3Q68CJ9 461 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 LRSAM1Q6UWE0 723 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 Q6ZUG5 572 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 CENPQQ7L2Z9 268 aaPredicted RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 KIAA0907Q7Z7F0 614 aaPredicted RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 NOP9Q86U38 636 aaKnown RBP4.05□□□□□ -1.76
HERC1-203ENST00000558532 KLHL36Q8N4N3 616 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 NINJ1Q92982 152 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 RELTQ969Z4 430 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 FEZ1Q99689 392 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 ORAI3Q9BRQ5 295 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 UCKL1Q9NWZ5 548 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 ADAM29Q9UKF5 820 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 PRDM4Q9UKN5 801 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 INVSQ9Y283 1065 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 ITSN2Q9NZM3 1697 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 WDR62O43379 1518 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 ABCC10Q5T3U5 1492 aa4.05□□□□□ -1.76
HERC1-203ENST00000558532 ARHGAP31Q2M1Z3 1444 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 MTUS2Q5JR59 1369 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 TRPM1Q7Z4N2 1603 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 PTPDC1A2A3K4 754 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 H0Y858 1186 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 FOXP2O15409 715 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 HIP1RO75146 1068 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 KRT37O76014 449 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 HSP90AA1P07900 732 aaKnown RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 POU3F2P20265 443 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 CSF2RBP32927 897 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 KIAA2012Q0VF49 1180 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 NFATC3Q12968 1075 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 ARHGAP44Q17R89 818 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 SKOR2Q2VWA4 1001 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 TBC1D10BQ4KMP7 808 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 DALRD3Q5D0E6 543 aaKnown RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 UBXN11Q5T124 520 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 KANK2Q63ZY3 851 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 CDCA2Q69YH5 1023 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 CC2D1AQ6P1N0 951 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 GIMAP6Q6P9H5 292 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 RTN4RL1Q86UN2 441 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 LRRTM3Q86VH5 581 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 NIM1KQ8IY84 436 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 LGI4Q8N135 537 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 FOXRED1Q96CU9 486 aaPredicted RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 AJUBAQ96IF1 538 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 WNK4Q96J92 1243 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 RBM15Q96T37 977 aaKnown RBP eCLIP4.04□□□□□ -1.76
HERC1-203ENST00000558532 BDH2Q9BUT1 245 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 KATNBL1Q9H079 304 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 PDCL3Q9H2J4 239 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 PNNQ9H307 717 aaKnown RBP4.04□□□□□ -1.76
HERC1-203ENST00000558532 GALNT8Q9NY28 637 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 B4GALT6Q9UBX8 382 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 ASB1Q9Y576 335 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 CAMSAP2Q08AD1 1489 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 RTEL1-TNFRSF6BF6WH68 1400 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 DAPK1P53355 1430 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 NCOA3Q9Y6Q9 1424 aa4.04□□□□□ -1.76
HERC1-203ENST00000558532 RNF17Q9BXT8 1623 aaKnown RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 NCANO14594 1321 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 EIF4G3O43432 1585 aaKnown RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 GOLGA6L22H0YM25 854 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 SYN1P17600 705 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 TOP3AQ13472 1001 aaPredicted RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 CFAP100Q494V2 611 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 BORAQ6PGQ7 559 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 UBE2R2Q712K3 238 aaPredicted RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 GPR155Q7Z3F1 870 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 FAM124AQ86V42 546 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 REXO1L1PQ8IX06 675 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 DHX37Q8IY37 1157 aaKnown RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 KBTBD2Q8IY47 623 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 GBP4Q96PP9 640 aa4.03□□□□□ -1.76
HERC1-203ENST00000558532 TARS2Q9BW92 718 aaKnown RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 SSBP3Q9BWW4 388 aaPredicted RBP4.03□□□□□ -1.76
HERC1-203ENST00000558532 BTBD2Q9BX70 525 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms