RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 ACCSQ96QU6 501 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.75■□□□□ 0.27
AP4E1-202ENST00000558439 FBXL5Q9UKA1 691 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 PCDHAC2Q9Y5I4 1007 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 IFNB1P01574 187 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 IL1R1P14778 569 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 KLHDC7AQ5VTJ3 777 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 TLR10Q9BXR5 811 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 SIK3Q9Y2K2 1263 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 A0A087WUV0 522 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 MSH4O15457 936 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 ADCY8P40145 1251 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 AMPD2Q01433 879 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 LRRC31Q6UY01 552 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 AKAP3O75969 853 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 TM4SF1P30408 202 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 ECE1P42892 770 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 DMP1Q13316 513 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 EDRF1Q3B7T1 1238 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 INTS2Q9H0H0 1204 aaKnown RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 PSD3Q9NYI0 1048 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 NYAP2Q9P242 653 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 KDM4FA0A1W2PPD8 638 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 SHROOM1Q2M3G4 852 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 CEP55Q53EZ4 464 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
AP4E1-202ENST00000558439 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 HAS1Q92839 578 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 SAAL1Q96ER3 474 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 CEP170P1Q96L14 293 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 NT5C1BQ96P26 610 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
AP4E1-202ENST00000558439 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 MAGOHP61326 146 aaKnown RBP16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ECM1Q16610 540 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 KAZNQ674X7 775 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 EHD4Q9H223 541 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
AP4E1-202ENST00000558439 CCDC188H7C350 402 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 HIP1RO75146 1068 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 LIG4P49917 911 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 SEC24CP53992 1094 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 CUL1Q13616 776 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 GIT2Q14161 759 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 DCUN1D2Q6PH85 259 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 IWS1Q96ST2 819 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 RAVER2Q9HCJ3 691 aaKnown RBP16.73■□□□□ 0.27
AP4E1-202ENST00000558439 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ZBTB39O15060 712 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 SOX5P35711 763 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 MAGEA9P43362 315 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 C1orf112Q9NSG2 853 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ANKFY1Q9P2R3 1169 aa16.73■□□□□ 0.27
AP4E1-202ENST00000558439 ZNF263O14978 683 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 CASP5P51878 434 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 CDK17Q00537 523 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 KCNA1Q09470 495 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 OTUD6AQ7L8S5 288 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 ZNF571Q7Z3V5 609 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 SLC35G2Q8TBE7 412 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 KMT5AQ9NQR1 393 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 SUGT1Q9Y2Z0 365 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 LRRIQ4A6NIV6 560 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 GAS8O95995 478 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 CD19P15391 556 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 PON1P27169 355 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 MFAP3P55082 362 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 LIN9Q5TKA1 542 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 STK32BQ9NY57 414 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 FEZ2Q9UHY8 353 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 MYO1FO00160 1098 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 SYT2Q8N9I0 419 aaPredicted RBP16.72■□□□□ 0.27
AP4E1-202ENST00000558439 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 LCMT1Q9UIC8 334 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
AP4E1-202ENST00000558439 FMO5P49326 533 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 PPP2R5EQ16537 467 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 METTL13Q8N6R0 699 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 INTS9Q9NV88 658 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms