RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 MTCH2Q9Y6C9 303 aa11.43□□□□□ -0.58
USP3-207ENST00000558218 CDY2AQ9Y6F7 541 aa11.43□□□□□ -0.58
USP3-207ENST00000558218 PTPRSQ13332 1948 aa11.43□□□□□ -0.58
USP3-207ENST00000558218 IGSF9BQ9UPX0 1349 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 DDX39AO00148 427 aaKnown RBP11.42□□□□□ -0.58
USP3-207ENST00000558218 GAS7O60861 476 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 GHRP10912 638 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 ATP4AP20648 1035 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 AK2P54819 239 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 CDC42EP1Q00587 391 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 STK3Q13188 491 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 NONOQ15233 471 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP3-207ENST00000558218 NPY5RQ15761 445 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 AAK1Q2M2I8 961 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 CKAP2LQ8IYA6 745 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 KIAA0319LQ8IZA0 1049 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 PHF20Q9BVI0 1012 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 TEKT3Q9BXF9 490 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 OSBPL7Q9BZF2 842 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 SUGCTQ9HAC7 445 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 DISC1Q9NRI5 854 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 COG5Q9UP83 839 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 SAMM50Q9Y512 469 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 TTC3P53804 2025 aa11.42□□□□□ -0.58
USP3-207ENST00000558218 COL4A6Q14031 1691 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 CCDC194A0A1B0GVG4 234 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 LCHNA4D1U4 455 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 ZBTB42B2RXF5 422 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 TBX3O15119 743 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 LPXNO60711 386 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 PSMD10O75832 226 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 RB1P06400 928 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
USP3-207ENST00000558218 TMOD1P28289 359 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 MRPS5P82675 430 aaKnown RBP11.41□□□□□ -0.58
USP3-207ENST00000558218 GRB10Q13322 594 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 LRCH2Q5VUJ6 765 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 THSD4Q6ZMP0 1018 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 TMCO2Q7Z6W1 182 aaPredicted RBP11.41□□□□□ -0.58
USP3-207ENST00000558218 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
USP3-207ENST00000558218 FAM49AQ9H0Q0 323 aaPredicted RBP11.41□□□□□ -0.58
USP3-207ENST00000558218 CERS4Q9HA82 394 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 THEGQ9P2T0 379 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 HCSTQ9UBK5 93 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 RWDD3Q9Y3V2 267 aa11.41□□□□□ -0.58
USP3-207ENST00000558218 PRRC2BQ5JSZ5 2229 aaKnown RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 RFXAPO00287 272 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 GPR182O15218 404 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 ARHGEF15O94989 841 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 STAG3L1P0CL83 205 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 NEK4P51957 841 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 CRYBB1P53674 252 aaPredicted RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 CCDC85BQ15834 202 aaPredicted RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 FAM117BQ6P1L5 589 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 B3GNT9Q6UX72 402 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 NEK8Q86SG6 692 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 CRIPAKQ8N1N5 446 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 TRAPPC12Q8WVT3 735 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 AGO3Q9H9G7 860 aaKnown RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.58
USP3-207ENST00000558218 PADI3Q9ULW8 664 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 CHD9Q3L8U1 2897 aa11.4□□□□□ -0.58
USP3-207ENST00000558218 EPOPA6NHQ4 379 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 C5orf67F2Z3F1 127 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 H3BNC9 293 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP3-207ENST00000558218 DGKIO75912 1065 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 UPP2O95045 317 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 CTDNEP1O95476 244 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 C22orf31O95567 290 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 OATP04181 439 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 CD52P31358 61 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 PAK2Q13177 524 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 ME3Q16798 604 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 PTPROQ16827 1216 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 XKR3Q5GH77 459 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 MIER3Q7Z3K6 550 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 RTN4RL1Q86UN2 441 aaPredicted RBP11.39□□□□□ -0.59
USP3-207ENST00000558218 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 ETNPPLQ8TBG4 499 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 EVPLQ92817 2033 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 ZNF689Q96CS4 500 aaPredicted RBP11.39□□□□□ -0.59
USP3-207ENST00000558218 AIFM3Q96NN9 605 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 BRMS1Q9HCU9 246 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 C1orf112Q9NSG2 853 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
USP3-207ENST00000558218 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms