RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 EVPLQ92817 2033 aa10.02□□□□□ -0.8
SPG11-207ENST00000558138 DENND3A2RUS2 1198 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 ARHGEF35A5YM69 484 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 ZBTB42B2RXF5 422 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 TLL1O43897 1013 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 SLITRK3O94933 977 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 UPP2O95045 317 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 DNAJB2P25686 324 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.81
SPG11-207ENST00000558138 NLRP11P59045 1033 aaKnown RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 MGAT3Q09327 533 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 LPIN1Q14693 890 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 EMC2Q15006 297 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 FOXD4L6Q3SYB3 417 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 FAM109BQ6ICB4 259 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 POTEGQ6S5H5 508 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 FOXD4L3Q6VB84 417 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 ANO5Q75V66 913 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 RHPN2Q8IUC4 686 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 USP38Q8NB14 1042 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 PIGOQ8TEQ8 1089 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 TCP11Q8WWU5 503 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 TIFAQ96CG3 184 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 ZSCAN16Q9H4T2 348 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 SUCLA2Q9P2R7 463 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 DAXXQ9UER7 740 aaPredicted RBP10.02□□□□□ -0.81
SPG11-207ENST00000558138 PPME1Q9Y570 386 aa10.02□□□□□ -0.81
SPG11-207ENST00000558138 GPR182O15218 404 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 MAFO75444 373 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 MED24O75448 989 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 PRPHP41219 470 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 CRYBB1P53674 252 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 DEFB103AP81534 67 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 ATP2C1P98194 919 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 RESTQ13127 1097 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 SF3A1Q15459 793 aaKnown RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 MAEAQ7L5Y9 396 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 CATSPER3Q86XQ3 398 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 HERC6Q8IVU3 1022 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 DEFB123Q8N688 67 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 PHOSPHO2Q8TCD6 241 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 PSPC1Q8WXF1 523 aaKnown RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 TMEM143Q96AN5 459 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 NACC1Q96RE7 527 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 YME1L1Q96TA2 773 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 POLR3CQ9BUI4 534 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 PBX4Q9BYU1 374 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 GCOM2Q9BZD3 368 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 NKX2-4Q9H2Z4 354 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 SLC28A3Q9HAS3 691 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 ANKEF1Q9NU02 776 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 DDX19AQ9NUU7 478 aaKnown RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 WRAP73Q9P2S5 460 aaPredicted RBP10.01□□□□□ -0.81
SPG11-207ENST00000558138 LRFN2Q9ULH4 789 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 KDM3AQ9Y4C1 1321 aa10.01□□□□□ -0.81
SPG11-207ENST00000558138 A0A087WWV3 80 aa10□□□□□ -0.81
SPG11-207ENST00000558138 GAS2O43903 313 aaKnown RBP10□□□□□ -0.81
SPG11-207ENST00000558138 DGAT1O75907 488 aa10□□□□□ -0.81
SPG11-207ENST00000558138 SSBP05455 408 aaKnown RBP eCLIP10□□□□□ -0.81
SPG11-207ENST00000558138 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
SPG11-207ENST00000558138 PDIA4P13667 645 aaKnown RBP10□□□□□ -0.81
SPG11-207ENST00000558138 ZSCAN20P17040 1043 aaPredicted RBP10□□□□□ -0.81
SPG11-207ENST00000558138 SFPQP23246 707 aaKnown RBP eCLIP10□□□□□ -0.81
SPG11-207ENST00000558138 RPA1P27694 616 aa10□□□□□ -0.81
SPG11-207ENST00000558138 PBX2P40425 430 aa10□□□□□ -0.81
SPG11-207ENST00000558138 GPC3P51654 580 aa10□□□□□ -0.81
SPG11-207ENST00000558138 CDC42EP1Q00587 391 aa10□□□□□ -0.81
SPG11-207ENST00000558138 PDIA5Q14554 519 aa10□□□□□ -0.81
SPG11-207ENST00000558138 GPNMBQ14956 572 aa10□□□□□ -0.81
SPG11-207ENST00000558138 TARBP2Q15633 366 aaKnown RBP10□□□□□ -0.81
SPG11-207ENST00000558138 TMEM132AQ24JP5 1023 aa10□□□□□ -0.81
SPG11-207ENST00000558138 FAM102BQ5T8I3 360 aa10□□□□□ -0.81
SPG11-207ENST00000558138 RASIP1Q5U651 963 aa10□□□□□ -0.81
SPG11-207ENST00000558138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10□□□□□ -0.811e-8■■■■■ 35.1
SPG11-207ENST00000558138 Q7L0L9 218 aa10□□□□□ -0.81
SPG11-207ENST00000558138 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
SPG11-207ENST00000558138 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
SPG11-207ENST00000558138 CALML4Q96GE6 196 aa10□□□□□ -0.81
SPG11-207ENST00000558138 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
SPG11-207ENST00000558138 PLIN2Q99541 437 aa10□□□□□ -0.81
SPG11-207ENST00000558138 HSD17B14Q9BPX1 270 aa10□□□□□ -0.81
SPG11-207ENST00000558138 INO80BQ9C086 356 aaPredicted RBP10□□□□□ -0.81
SPG11-207ENST00000558138 AGO3Q9H9G7 860 aaKnown RBP10□□□□□ -0.81
SPG11-207ENST00000558138 PADI3Q9ULW8 664 aa10□□□□□ -0.81
SPG11-207ENST00000558138 MTMR6Q9Y217 621 aa10□□□□□ -0.81
SPG11-207ENST00000558138 NOC2LQ9Y3T9 749 aaKnown RBP10□□□□□ -0.81
SPG11-207ENST00000558138 PCDHA11Q9Y5I1 949 aa10□□□□□ -0.81
SPG11-207ENST00000558138 COL4A3BPQ9Y5P4 624 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms