RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 CXCL10P02778 98 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 ACTN1P12814 892 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 CDC25AP30304 524 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 CDC42EP1Q00587 391 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 POTEGQ6S5H5 508 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 LINC01465Q8N7H1 131 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 PIGOQ8TEQ8 1089 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.67■□□□□ 0.58
PBX4-202ENST00000557978 CELF4Q9BZC1 486 aaKnown RBP18.67■□□□□ 0.58
PBX4-202ENST00000557978 MTIF3Q9H2K0 278 aaKnown RBP18.67■□□□□ 0.58
PBX4-202ENST00000557978 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
PBX4-202ENST00000557978 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 AKT3Q9Y243 479 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 TRPV2Q9Y5S1 764 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 CDY2AQ9Y6F7 541 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 SQORQ9Y6N5 450 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 GBF1Q92538 1859 aa18.67■□□□□ 0.58
PBX4-202ENST00000557978 PP2D1A8MPX8 630 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 NBNO60934 754 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 DGAT1O75907 488 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 YEATS4O95619 227 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 CHRNA1P02708 482 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 ACRP10323 421 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 MARCKSP29966 332 aaPredicted RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 UBA7P41226 1012 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 RARRES1P49788 294 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 CLCN3P51790 818 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 EPHB4P54760 987 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 MGAT3Q09327 533 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 TMEM240Q5SV17 173 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 ZNF365Q70YC5 407 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 C16orf59Q7L2K0 433 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 LRRC71Q8N4P6 559 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 LINC00301Q8NCQ3 95 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 DDX19AQ9NUU7 478 aaKnown RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 TFIP11Q9UBB9 837 aaKnown RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 PPP6R2O75170 966 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 TMEM62Q0P6H9 643 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 MBTPS1Q14703 1052 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 HYIQ5T013 277 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 CABP7Q86V35 215 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 KRI1Q8N9T8 703 aaKnown RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 TCP11Q8WWU5 503 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 CALML4Q96GE6 196 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 MTRQ99707 1265 aa18.66■□□□□ 0.58
PBX4-202ENST00000557978 MMTAG2Q9BU76 263 aaKnown RBP18.66■□□□□ 0.58
PBX4-202ENST00000557978 SPTLC2O15270 562 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 VTNP04004 478 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 GPNMBQ14956 572 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 SHHQ15465 462 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 ZRSR1Q15695 479 aaKnown RBP18.65■□□□□ 0.58
PBX4-202ENST00000557978 ECM1Q16610 540 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 CNKSR3Q6P9H4 555 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 ATP6V0A4Q9HBG4 840 aa18.65■□□□□ 0.58
PBX4-202ENST00000557978 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
PBX4-202ENST00000557978 PTPRSQ13332 1948 aa18.64■□□□□ 0.58
PBX4-202ENST00000557978 ARHGEF35A5YM69 484 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 BAIAP3O94812 1187 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 CRYBB1P53674 252 aaPredicted RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 NLRP11P59045 1033 aaKnown RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 DNM1Q05193 864 aaKnown RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 GRIN1Q05586 938 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 EMC2Q15006 297 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 FBXO47Q5MNV8 452 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 ODR4Q5SWX8 454 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 C9orf50Q5SZB4 431 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 KCNG4Q8TDN1 519 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 SEPT8Q92599 483 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 APBB2Q92870 758 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 RNPC3Q96LT9 517 aaKnown RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 CSRNP2Q9H175 543 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 SUCLA2Q9P2R7 463 aaPredicted RBP18.64■□□□□ 0.57
PBX4-202ENST00000557978 GINS2Q9Y248 185 aa18.64■□□□□ 0.57
PBX4-202ENST00000557978 A0A087WWV3 80 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 ASAP2O43150 1006 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 EFCAB14O75071 495 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 EYA4O95677 639 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 TXLNAP40222 546 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 IKBKEQ14164 716 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 PLEKHG4Q58EX7 1191 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 TSHZ1Q6ZSZ6 1077 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 RASSF8Q8NHQ8 419 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 PSPC1Q8WXF1 523 aaKnown RBP18.63■□□□□ 0.57
PBX4-202ENST00000557978 HERVK_113Q902F9 699 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 VWCEQ96DN2 955 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 IFIH1Q9BYX4 1025 aaKnown RBP18.63■□□□□ 0.57
PBX4-202ENST00000557978 CCSER1Q9C0I3 900 aa18.63■□□□□ 0.57
PBX4-202ENST00000557978 E9PMD0 336 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 GPR32O75388 356 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 GHRP10912 638 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms