RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 FSTL4Q6MZW2 842 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 TUBA3EQ6PEY2 450 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 BRAPQ7Z569 592 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 THEMISQ8N1K5 641 aaPredicted RBP4.34□□□□□ -1.71
GPHN-216ENST00000557678 IGSF22Q8N9C0 903 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 IL17DQ8TAD2 202 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 PMFBP1Q8TBY8 1022 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 CFHR4Q92496 578 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 CELF4Q9BZC1 486 aaKnown RBP4.34□□□□□ -1.71
GPHN-216ENST00000557678 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 SNTG2Q9NY99 539 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 GIT1Q9Y2X7 761 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 ASB1Q9Y576 335 aa4.34□□□□□ -1.71
GPHN-216ENST00000557678 WDR33Q9C0J8 1336 aaKnown RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 RASSF10A6NK89 507 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 GOLGA6L22H0YM25 854 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 CYP27B1O15528 508 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 H2AFYO75367 372 aaKnown RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 STAT3P40763 770 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 ATP2C1P98194 919 aaPredicted RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 DUSP8Q13202 625 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 RIN1Q13671 783 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 RASA3Q14644 834 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 ACAP1Q15027 740 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 TMEM177Q53S58 311 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 OVCH1Q7RTY7 1134 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 ADGRE4PQ86SQ3 457 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 ZSWIM2Q8NEG5 633 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 GCDHQ92947 438 aaPredicted RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 CHFRQ96EP1 664 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 RPL10LQ96L21 214 aaKnown RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 IGSF5Q9NSI5 407 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 SAE1Q9UBE0 346 aaPredicted RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 RBM8AQ9Y5S9 174 aaKnown RBP4.33□□□□□ -1.72
GPHN-216ENST00000557678 B3GALT1Q9Y5Z6 326 aa4.33□□□□□ -1.72
GPHN-216ENST00000557678 NARSO43776 548 aaKnown RBP4.32□□□□□ -1.72
GPHN-216ENST00000557678 KLHDC10Q6PID8 442 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 FGD2Q7Z6J4 655 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 GSTCDQ8NEC7 633 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 DLG3Q92796 817 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 E2F7Q96AV8 911 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 SCLYQ96I15 445 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 BOCQ9BWV1 1114 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 PCIF1Q9H4Z3 704 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 MMRN2Q9H8L6 949 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 MSL2Q9HCI7 577 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 PARPBPQ9NWS1 579 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 AURKAIP1Q9NWT8 199 aaPredicted RBP4.32□□□□□ -1.72
GPHN-216ENST00000557678 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
GPHN-216ENST00000557678 TCRBV16S1A1N1A0A5B0 115 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 MAKP20794 623 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 SDHAP31040 664 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 KIF11P52732 1056 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 SESN2P58004 480 aaPredicted RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 BPIFB4P59827 614 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 SLC6A3Q01959 620 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 ALDH6A1Q02252 535 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 ROM1Q03395 351 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 CNGB1Q14028 1251 aaPredicted RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 CATSPEREQ5SY80 951 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 KRT40Q6A162 431 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 DDX53Q86TM3 631 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 GSPT2Q8IYD1 628 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 ZNF483Q8TF39 744 aaPredicted RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 CACTINQ8WUQ7 758 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 RABGGTAQ92696 567 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 MRPL4Q9BYD3 311 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 AGO3Q9H9G7 860 aaKnown RBP4.31□□□□□ -1.72
GPHN-216ENST00000557678 DENND2AQ9ULE3 1009 aa4.31□□□□□ -1.72
GPHN-216ENST00000557678 CCDC163A0A0D9SF12 145 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 M0R2C6 588 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 RPS6KA4O75676 772 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 NPTXRO95502 500 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 RANGAP1P46060 587 aaPredicted RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 RGS3P49796 1198 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 HGFACQ04756 655 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 SERINC3Q13530 473 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 RRP1BQ14684 758 aaKnown RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 PRAMEF9Q5VWM5 478 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 CC2D1AQ6P1N0 951 aaPredicted RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 ABHD17CQ6PCB6 329 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 LRP10Q7Z4F1 713 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 ANKRD35Q8N283 1001 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 ANKRD53Q8N9V6 530 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 THAP3Q8WTV1 239 aaPredicted RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 GFM2Q969S9 779 aaKnown RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 SLC7A6OSQ96CW6 309 aaPredicted RBP4.3□□□□□ -1.72
GPHN-216ENST00000557678 CLIP3Q96DZ5 547 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 TUBGCP5Q96RT8 1024 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 MPHOSPH9Q99550 1183 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 SLC2A4RGQ9NR83 387 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 NCDNQ9UBB6 729 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 RCAN3Q9UKA8 241 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 VWA7Q9Y334 891 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 SH3BP1Q9Y3L3 701 aa4.3□□□□□ -1.72
GPHN-216ENST00000557678 A0A087X1B8 175 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 UBA6A0AVT1 1052 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms