RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 SERINC5Q86VE9 423 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-213ENST00000557644 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
NEDD1-213ENST00000557644 STAMQ92783 540 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 SEZ6LQ9BYH1 1024 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-213ENST00000557644 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 MAFO75444 373 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-213ENST00000557644 UBE2HP62256 183 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 RAD51AP2Q09MP3 1159 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-213ENST00000557644 EMC2Q15006 297 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 IQUBQ8NA54 791 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 TOX2Q96NM4 488 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 XPNPEP1Q9NQW7 623 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 PCDHA2Q9Y5H9 948 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17■□□□□ 0.31
NEDD1-213ENST00000557644 IGKV6-21A0A0C4DH24 114 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 DCDC2CA8MYV0 355 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 ARSHQ5FYA8 562 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 RINT1Q6NUQ1 792 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 DNAJB3Q8WWF6 145 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 TMEM143Q96AN5 459 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 MTRQ99707 1265 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 GPRC5CQ9NQ84 441 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 PDLIM7Q9NR12 457 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 SERTAD1Q9UHV2 236 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 MAGEB2O15479 319 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 DGAT1O75907 488 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 SNW1Q13573 536 aaKnown RBP17■□□□□ 0.31
NEDD1-213ENST00000557644 C1orf186Q6ZWK4 172 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
NEDD1-213ENST00000557644 LINC01465Q8N7H1 131 aa17■□□□□ 0.31
NEDD1-213ENST00000557644 ACTN4O43707 911 aaKnown RBP16.99■□□□□ 0.31
NEDD1-213ENST00000557644 NR1I2O75469 434 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 ZNF202O95125 648 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 RFC5P40937 340 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 GPBP1Q86WP2 473 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 KIAA0319LQ8IZA0 1049 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 ENGASEQ8NFI3 743 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 ARID2Q68CP9 1835 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 TLR3O15455 904 aaKnown RBP16.99■□□□□ 0.31
NEDD1-213ENST00000557644 CYP11B2P19099 503 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
NEDD1-213ENST00000557644 TMEM62Q0P6H9 643 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 PTK7Q13308 1070 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 GRAMD1CQ8IYS0 662 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 RETREG2Q8NC44 543 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 PPP1R16BQ96T49 567 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 PPME1Q9Y570 386 aa16.99■□□□□ 0.31
NEDD1-213ENST00000557644 VTNP04004 478 aa16.98■□□□□ 0.31
NEDD1-213ENST00000557644 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
NEDD1-213ENST00000557644 TAF2Q6P1X5 1199 aa16.98■□□□□ 0.31
NEDD1-213ENST00000557644 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
NEDD1-213ENST00000557644 ZNF668Q96K58 619 aaPredicted RBP16.98■□□□□ 0.31
NEDD1-213ENST00000557644 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 MYMKA6NI61 221 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 CLTBP09497 229 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 CASP1P29466 404 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 THPOP40225 353 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 FAM160A1Q05DH4 1040 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 UMODL1Q5DID0 1318 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 EVPLQ92817 2033 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 PRDM5Q9NQX1 630 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-213ENST00000557644 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 GOLGA6L22H0YM25 854 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 AFMP43652 599 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 HTATIP2Q9BUP3 242 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 SUCLA2Q9P2R7 463 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-213ENST00000557644 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 AKT3Q9Y243 479 aa16.97■□□□□ 0.31
NEDD1-213ENST00000557644 TRIM43BA6NCK2 446 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 RSPH10B2B2RC85 870 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 CTSHP09668 335 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 RSPH10BP0C881 870 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 TMOD1P28289 359 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 MCM4P33991 863 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 DAW1Q8N136 415 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 DPF3Q92784 378 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 TRIM43Q96BQ3 446 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 PYM1Q9BRP8 204 aaKnown RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 PPP1R12CQ9BZL4 782 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 CUEDC2Q9H467 287 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 SFI1A8K8P3 1242 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms