RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NME8Q8N427 588 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 PCDHB12Q9Y5F1 795 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 DENND4AQ7Z401 1863 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 COL1A2P08123 1366 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 IPO5O00410 1097 aaKnown RBP16■□□□□ 0.15
SLIRP-210ENST00000557431 FGFR4P22455 802 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 AP3B2Q13367 1082 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 DUSP6Q16828 381 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 MIS18BP1Q6P0N0 1132 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 TRIM67Q6ZTA4 783 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 SLC24A5Q71RS6 500 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 LRRC71Q8N4P6 559 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
SLIRP-210ENST00000557431 PBXIP1Q96AQ6 731 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
SLIRP-210ENST00000557431 ARID2Q68CP9 1835 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 HIDE1A8MVS5 230 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 GPR32O75388 356 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 SLC26A2P50443 739 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 ZXDAP98168 799 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 DSC3Q14574 896 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 ZNF484Q5JVG2 852 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 DHX32Q7L7V1 743 aaKnown RBP15.99■□□□□ 0.15
SLIRP-210ENST00000557431 CRYGNQ8WXF5 182 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 GJA10Q969M2 543 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 MFSD14AQ96MC6 490 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 ATP6V0A4Q9HBG4 840 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 C1orf112Q9NSG2 853 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 FAM86C1Q9NVL1 165 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
SLIRP-210ENST00000557431 FSCN2O14926 492 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 GPR182O15218 404 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 TECP42680 631 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 VCPP55072 806 aaKnown RBP15.98■□□□□ 0.15
SLIRP-210ENST00000557431 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
SLIRP-210ENST00000557431 RNF169Q8NCN4 708 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 CASD1Q96PB1 797 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 TCF25Q9BQ70 676 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 PHF7Q9BWX1 381 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-210ENST00000557431 ENTPD7Q9NQZ7 604 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
SLIRP-210ENST00000557431 TDRD15B5MCY1 1934 aaKnown RBP15.98■□□□□ 0.15
SLIRP-210ENST00000557431 hCG_1984214I3L0E3 225 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 CSDE1O75534 798 aaKnown RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 PDGFBP01127 241 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 UBE3AQ05086 875 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 CBX2Q14781 532 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 PKN1Q16512 942 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 UGCGQ16739 394 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 PRR16Q569H4 304 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 EFCAB12Q6NXP0 572 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 NIPA1Q7RTP0 329 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 ZNF713Q8N859 430 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 FEZF2Q8TBJ5 459 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 SUSD6Q92537 303 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 PHKBQ93100 1093 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 AAASQ9NRG9 546 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 TMEM161AQ9NX61 479 aa15.97■□□□□ 0.15
SLIRP-210ENST00000557431 MAFBQ9Y5Q3 323 aaPredicted RBP15.97■□□□□ 0.15
SLIRP-210ENST00000557431 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 CHMP2AO43633 222 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 EDIL3O43854 480 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 ZNF862O60290 1169 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 CYP3A4P08684 503 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 METAP2P50579 478 aaKnown RBP eCLIP15.96■□□□□ 0.157e-8■□□□□ 9.9
SLIRP-210ENST00000557431 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 CLLU1OSQ5K130 101 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 ANKRD54Q6NXT1 300 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 SYCE2Q6PIF2 218 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 MRPS27Q92552 414 aaKnown RBP15.96■□□□□ 0.15
SLIRP-210ENST00000557431 S1PR5Q9H228 398 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 SMOC2Q9H3U7 446 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 TCEAL9Q9UHQ7 104 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 SAMM50Q9Y512 469 aa15.96■□□□□ 0.15
SLIRP-210ENST00000557431 TMEM150BA6NC51 233 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 PSAPP07602 524 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 LAG3P18627 525 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 CA8P35219 290 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 FAM189BP81408 668 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 TCF15Q12870 199 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 DRP2Q13474 957 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 KCNC3Q14003 757 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 ZNF746Q6NUN9 644 aaPredicted RBP15.95■□□□□ 0.14
SLIRP-210ENST00000557431 KANK3Q6NY19 840 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 Q6ZUG5 572 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 SUGP1Q8IWZ8 645 aaKnown RBP15.95■□□□□ 0.14
SLIRP-210ENST00000557431 REXO1Q8N1G1 1221 aaKnown RBP15.95■□□□□ 0.14
SLIRP-210ENST00000557431 LINC01465Q8N7H1 131 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 HELQQ8TDG4 1101 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 BRF1Q92994 677 aa15.95■□□□□ 0.14
SLIRP-210ENST00000557431 LENG9Q96B70 501 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms