RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 ELAC1Q9H777 363 aaKnown RBP19.4■□□□□ 0.7
NEDD1-210ENST00000557400 TYW1Q9NV66 732 aaKnown RBP19.4■□□□□ 0.7
NEDD1-210ENST00000557400 HCSTQ9UBK5 93 aa19.4■□□□□ 0.7
NEDD1-210ENST00000557400 TCEAL9Q9UHQ7 104 aa19.4■□□□□ 0.7
NEDD1-210ENST00000557400 MAFBQ9Y5Q3 323 aaPredicted RBP19.4■□□□□ 0.7
NEDD1-210ENST00000557400 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 PER2O15055 1255 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 VTNP04004 478 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 FGFR1P11362 822 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 LAG3P18627 525 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 FAM189BP81408 668 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 CBX2Q14781 532 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-210ENST00000557400 BMP8AQ7Z5Y6 402 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 PHF7Q9BWX1 381 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-210ENST00000557400 ZMYND12Q9H0C1 365 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 NAP1L2Q9ULW6 460 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-210ENST00000557400 CEP131Q9UPN4 1083 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 C5orf42Q9H799 3197 aa19.39■□□□□ 0.69
NEDD1-210ENST00000557400 GPR32O75388 356 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 PSAPP07602 524 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 ADD1P35611 737 aaKnown RBP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 METAP2P50579 478 aaKnown RBP eCLIP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 ERVFC1P60507 584 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 DSC3Q14574 896 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 DUSP6Q16828 381 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 TRIM67Q6ZTA4 783 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 TRMT1LQ7Z2T5 733 aaKnown RBP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 REXO1Q8N1G1 1221 aaKnown RBP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 VN1R2Q8NFZ6 395 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 CCDC12Q8WUD4 166 aaPredicted RBP19.38■□□□□ 0.69
NEDD1-210ENST00000557400 C6orf50Q9HD87 102 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 LZTS1Q9Y250 596 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 PCDHA10Q9Y5I2 948 aa19.38■□□□□ 0.69
NEDD1-210ENST00000557400 TMEM221A6NGB7 291 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 M0R296 226 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 FSCN2O14926 492 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 MAGEB2O15479 319 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 ATF7P17544 494 aaPredicted RBP19.37■□□□□ 0.69
NEDD1-210ENST00000557400 CLCN3P51790 818 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 FGD1P98174 961 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 RBM10P98175 930 aaKnown RBP19.37■□□□□ 0.69
NEDD1-210ENST00000557400 SUSD6Q92537 303 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 FAM167AQ96KS9 214 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 TMEM117Q9H0C3 514 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 CWH43Q9H720 699 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 GABBR1Q9UBS5 961 aa19.37■□□□□ 0.69
NEDD1-210ENST00000557400 ADAMTS3O15072 1205 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 HOXA2O43364 376 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 SRGAP2BP0DMP2 458 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 ZXDAP98168 799 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 PLCB3Q01970 1234 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 PRR16Q569H4 304 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
NEDD1-210ENST00000557400 RPGRIP1Q96KN7 1286 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 MAP7D2Q96T17 732 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 PUF60Q9UHX1 559 aaKnown RBP19.36■□□□□ 0.69
NEDD1-210ENST00000557400 AKT3Q9Y243 479 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 SAMM50Q9Y512 469 aa19.36■□□□□ 0.69
NEDD1-210ENST00000557400 KIAA1671Q9BY89 1806 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 TMOD1P28289 359 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 GNA11P29992 359 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 CIITAP33076 1130 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 NLRP11P59045 1033 aaKnown RBP19.35■□□□□ 0.69
NEDD1-210ENST00000557400 APOBRQ0VD83 1088 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 PKN1Q16512 942 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 PLPP4Q5VZY2 271 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 TMEM184AQ6ZMB5 413 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 ZNF710Q8N1W2 664 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 LINC01465Q8N7H1 131 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 RASGRP4Q8TDF6 673 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 PBXIP1Q96AQ6 731 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
NEDD1-210ENST00000557400 WDR64B1ANS9 1081 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 PPM1AP35813 382 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 KCNC3Q14003 757 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 EFCAB12Q6NXP0 572 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 KCNT2Q6UVM3 1135 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 SUGP1Q8IWZ8 645 aaKnown RBP19.34■□□□□ 0.69
NEDD1-210ENST00000557400 ABI1Q8IZP0 508 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 LRRC43Q8N309 656 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 LENG9Q96B70 501 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 ZNF558Q96NG5 402 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 CASD1Q96PB1 797 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 TCF25Q9BQ70 676 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
NEDD1-210ENST00000557400 ENTPD7Q9NQZ7 604 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 RNF19AQ9NV58 838 aa19.34■□□□□ 0.69
NEDD1-210ENST00000557400 NID2Q14112 1375 aa19.33■□□□□ 0.69
NEDD1-210ENST00000557400 PRPF3O43395 683 aaKnown RBP19.33■□□□□ 0.68
NEDD1-210ENST00000557400 ZNF862O60290 1169 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 CDC45O75419 566 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 ZSCAN20P17040 1043 aaPredicted RBP19.33■□□□□ 0.68
NEDD1-210ENST00000557400 EIF4BP23588 611 aaKnown RBP19.33■□□□□ 0.68
NEDD1-210ENST00000557400 LRRC55Q6ZSA7 311 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 SKAP1Q86WV1 359 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 ECHDC2Q86YB7 292 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 LRRC71Q8N4P6 559 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 BICD2Q8TD16 824 aa19.33■□□□□ 0.68
NEDD1-210ENST00000557400 BRF1Q92994 677 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms