RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CYP2J2P51589 502 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.91
SYNE3-205ENST00000557275 LRRC63Q05C16 580 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 APPL2Q8NEU8 664 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 EME1Q96AY2 570 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 MTERF3Q96E29 417 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 KCNK16Q96T55 309 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 NUP85Q9BW27 656 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 GINS2Q9Y248 185 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.91
SYNE3-205ENST00000557275 PDE9AO76083 593 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 CMA1P23946 247 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 OLFML2BQ68BL8 750 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 A0A1W2PQ27 194 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 A0A1W2PQ64 194 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 A0A1W2PQD8 194 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 BRAFP15056 766 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 C1DQ13901 141 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 SARM1Q6SZW1 724 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TRIM24O15164 1050 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 CALB1P05937 261 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 HOXB7P09629 217 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.918e-11■■■■■ 48.3
SYNE3-205ENST00000557275 KLC4Q9NSK0 619 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 GMNCA6NCL1 334 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 DENND6AQ8IWF6 608 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 DSCC1Q9BVC3 393 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TMEM161AQ9NX61 479 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 KANSL1LA0AUZ9 987 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 SIX6OS1Q8N1H7 587 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 CACNA2D2Q9NY47 1150 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TRIM49P0CI25 452 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TRIM49CP0CI26 452 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 KRT1P04264 644 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 SERPING1P05155 500 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 ARHGEF16Q5VV41 709 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TCIRG1Q13488 830 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 E2F4Q16254 413 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 MAN2A1Q16706 1144 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 ARMCX5Q6P1M9 558 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 MOSPD2Q8NHP6 518 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 AFPP02771 609 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 HPCAP84074 193 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 RPL19P84098 196 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 DCAF15Q66K64 600 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 NEK10Q6ZWH5 1172 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TSPAN17Q96FV3 270 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 PHACTR3Q96KR7 559 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 MAGI1Q96QZ7 1491 aaPredicted RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 UBAP1LF5GYI3 381 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 BUB1O43683 1085 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 BTN2A1Q7KYR7 527 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 MFN1Q8IWA4 741 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
SYNE3-205ENST00000557275 MAPK8IP1Q9UQF2 711 aa9.39□□□□□ -0.91
SYNE3-205ENST00000557275 TBC1D1Q86TI0 1168 aaPredicted RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DNMBPQ6XZF7 1577 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 PLEKHG3A1L390 1219 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 RYBPQ8N488 228 aaPredicted RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ACAP3Q96P50 834 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 HACD3Q9P035 362 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DDAH1O94760 285 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 FAM102BQ5T8I3 360 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 MXD3Q9BW11 206 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 CHPF2Q9P2E5 772 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DLATP10515 647 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ACADSP16219 412 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 GNL1P36915 607 aaPredicted RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NNMTP40261 264 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ITGA1P56199 1179 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 PLIN2Q99541 437 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 KCNA1Q09470 495 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 UGP2Q16851 508 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 SLC10A5Q5PT55 438 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 SMYD3Q9H7B4 428 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NRBP1Q9UHY1 535 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms