RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 PPP2R5DQ14738 602 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 PARP10Q53GL7 1025 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 TNNI3KQ59H18 835 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 MEX3CQ5U5Q3 659 aaKnown RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 TSHZ3Q63HK5 1081 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 RUFY4Q6ZNE9 571 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 NLRP10Q86W26 655 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 ZNF34Q8IZ26 560 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 MCMBPQ9BTE3 642 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 CCDC8Q9H0W5 538 aaPredicted RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 SPATA6Q9NWH7 488 aaPredicted RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 PRR13Q9NZ81 148 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 TRMT112Q9UI30 125 aaKnown RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 ZNF451Q9Y4E5 1061 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 FPGT-TNNI3KV9GXZ4 949 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 CDHR2Q9BYE9 1310 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 PATL2C9JE40 543 aaKnown RBP5.32□□□□□ -1.56
SRP54-212ENST00000556992 MATN3O15232 486 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 SGSM2O43147 1006 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 GLI4P10075 376 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 CRKLP46109 303 aaKnown RBP5.32□□□□□ -1.56
SRP54-212ENST00000556992 PMS1P54277 932 aaKnown RBP5.32□□□□□ -1.56
SRP54-212ENST00000556992 GJA9P57773 515 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 ZXDAP98168 799 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 HLFQ16534 295 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 LRRFIP1Q32MZ4 808 aaKnown RBP5.32□□□□□ -1.56
SRP54-212ENST00000556992 TAF7LQ5H9L4 462 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 CCDC158Q5M9N0 1113 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 CLEC4GQ6UXB4 293 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 CYP2R1Q6VVX0 501 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 HS2ST1Q7LGA3 356 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 ATG9AQ7Z3C6 839 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 SLITRK4Q8IW52 837 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 KLHDC4Q8TBB5 520 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 IL17RAQ96F46 866 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 FAM89AQ96GI7 184 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 NEUROD6Q96NK8 337 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 UTP14AQ9BVJ6 771 aaKnown RBP5.32□□□□□ -1.56
SRP54-212ENST00000556992 SMPD4Q9NXE4 827 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 ZNF652Q9Y2D9 606 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 LTN1O94822 1766 aa5.32□□□□□ -1.56
SRP54-212ENST00000556992 ATRNO75882 1429 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 ADAMTS7Q9UKP4 1686 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 LRP5O75197 1615 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 ANKRD18BA2A2Z9 1011 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 KCNQ2O43526 872 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 PDE8AO60658 829 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 MAP4K4O95819 1239 aaPredicted RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 ZKSCAN1P17029 563 aaPredicted RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 CD247P20963 164 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 L1CAMP32004 1257 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 HSPA4P34932 840 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 NEK4P51957 841 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 GORABQ5T7V8 394 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 CWC27Q6UX04 472 aaKnown RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 B3GNT8Q7Z7M8 397 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 ZNF761Q86XN6 746 aaPredicted RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 TTLL11Q8NHH1 800 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.31□□□□□ -1.56
SRP54-212ENST00000556992 ZBTB8AQ96BR9 441 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 DHRS1Q96LJ7 313 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 HAUS7Q99871 368 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 SRRTQ9BXP5 876 aaKnown RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 RNF38Q9H0F5 515 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 BOLA2Q9H3K6 86 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 ZBTB1Q9Y2K1 713 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 SIT1Q9Y3P8 196 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 SLIT2O94813 1529 aa5.31□□□□□ -1.56
SRP54-212ENST00000556992 FAM208AQ9UK61 1670 aaKnown RBP5.31□□□□□ -1.56
SRP54-212ENST00000556992 SH3TC1Q8TE82 1336 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 KCPQ6ZWJ8 1503 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 STXBP3O00186 592 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 PPP1R11O60927 126 aaPredicted RBP5.3□□□□□ -1.56
SRP54-212ENST00000556992 FSHBP01225 129 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 ITGB3P05106 788 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 GPTP24298 496 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 PSMA5P28066 241 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 TIMM10P62072 90 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 ITPK1Q13572 414 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 FBXW10Q5XX13 1052 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 LDHAL6AQ6ZMR3 332 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 DEFB132Q7Z7B7 95 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 CPNE8Q86YQ8 564 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 MAP4K1Q92918 833 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 LOXL4Q96JB6 756 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 RBM15Q96T37 977 aaKnown RBP eCLIP5.3□□□□□ -1.56
SRP54-212ENST00000556992 FSD1Q9BTV5 496 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 NT5C1AQ9BXI3 368 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 TM6SF1Q9BZW5 370 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 LSG1Q9H089 658 aaKnown RBP5.3□□□□□ -1.56
SRP54-212ENST00000556992 SLKQ9H2G2 1235 aaPredicted RBP5.3□□□□□ -1.56
SRP54-212ENST00000556992 GULP1Q9UBP9 304 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 DBNLQ9UJU6 430 aaKnown RBP5.3□□□□□ -1.56
SRP54-212ENST00000556992 TRPC5Q9UL62 973 aaPredicted RBP5.3□□□□□ -1.56
SRP54-212ENST00000556992 ZNRF3Q9ULT6 936 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms