RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 NUDT19A8MXV4 375 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 TULP2O00295 520 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 AURKAO14965 403 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SGSM2O43147 1006 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SRGAP3O43295 1099 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 AP5Z1O43299 807 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 CBFA2T2O43439 604 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 EPHX1P07099 455 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ATF4P18848 351 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 PAMP19021 973 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 PSMA5P28066 241 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ERCC5P28715 1186 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 GJB2P29033 226 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 TNNT3P45378 269 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 AK2P54819 239 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 MVKQ03426 396 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 FHL2Q14192 279 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SLC9A5Q14940 896 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ANKRD1Q15327 319 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ANO6Q4KMQ2 910 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 HSP90AB4PQ58FF6 505 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 TAF7LQ5H9L4 462 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 IQCEQ6IPM2 695 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 KIAA1211LQ6NV74 962 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 CTR9Q6PD62 1173 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SARM1Q6SZW1 724 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 FILIP1Q7Z7B0 1213 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 LDHDQ86WU2 507 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 LRRC8AQ8IWT6 810 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 LZTR1Q8N653 840 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 BVESQ8NE79 360 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ADCY4Q8NFM4 1077 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 USP33Q8TEY7 942 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 VOPP1Q96AW1 172 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 ANAPC16Q96DE5 110 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 KIF1BPQ96EK5 621 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SHDQ96IW2 340 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 C16orf45Q96MC5 204 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 TTC14Q96N46 770 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 MEIS3Q99687 375 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 THUMPD2Q9BTF0 503 aaKnown RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 STK31Q9BXU1 1019 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 UPF3BQ9BZI7 483 aaKnown RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 CLSTN2Q9H4D0 955 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 TNFRSF12AQ9NP84 129 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 CWC15Q9P013 229 aaKnown RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 KIAA1522Q9P206 1035 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 STK26Q9P289 416 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 KLHL14Q9P2G3 628 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 MTMR6Q9Y217 621 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 AKT3Q9Y243 479 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SNX14Q9Y5W7 946 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 BACE2Q9Y5Z0 518 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 CYP46A1Q9Y6A2 500 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 V9GYY5 206 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SOS1Q07889 1333 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-208ENST00000556956 RAD50Q92878 1312 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 SALL3Q9BXA9 1300 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 LMTK2Q8IWU2 1503 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 FRMPD1Q5SYB0 1578 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 MROH1Q8NDA8 1641 aa3.33□□□□□ -1.88
SLIRP-208ENST00000556956 VPS37CA5D8V6 355 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 BECN2A8MW95 431 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 F8W031 263 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 HIP1O00291 1037 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 NPHS1O60500 1241 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 ZBTB7AO95365 584 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 SKILP12757 684 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 ZKSCAN1P17029 563 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 SDHBP21912 280 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CYP2C19P33261 490 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 SAFB2Q14151 953 aaKnown RBP eCLIP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 FXNQ16595 210 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 STX1AQ16623 288 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CCDC30Q5VVM6 783 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 LARP1BQ659C4 914 aaKnown RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 SLC4A10Q6U841 1118 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 TMCO3Q6UWJ1 677 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 RBM43Q6ZSC3 357 aaKnown RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 RUFY3Q7L099 469 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 TMC6Q7Z403 805 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 LUZP1Q86V48 1076 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CCDC83Q8IWF9 413 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 SCUBE1Q8IWY4 988 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CACTINQ8WUQ7 758 aaKnown RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CHMP4CQ96CF2 233 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CHFRQ96EP1 664 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 PEX11GQ96HA9 241 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 MRFAP1L1Q96HT8 127 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 GPATCH3Q96I76 525 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 COG3Q96JB2 828 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 FGD4Q96M96 766 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CCDC140Q96MF4 163 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 PRAM1Q96QH2 718 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 CHMP4AQ9BY43 222 aa3.32□□□□□ -1.88
SLIRP-208ENST00000556956 LSG1Q9H089 658 aaKnown RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 NAT10Q9H0A0 1025 aaKnown RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 ALDH8A1Q9H2A2 487 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-208ENST00000556956 ACBD3Q9H3P7 528 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms