RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 PPP1R13LQ8WUF5 828 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 TRIM43Q96BQ3 446 aaPredicted RBP18.29■□□□□ 0.52
PCNX4-213ENST00000556907 CALML4Q96GE6 196 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 CEP170P1Q96L14 293 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 LBHD1Q9BQE6 289 aaPredicted RBP18.29■□□□□ 0.52
PCNX4-213ENST00000556907 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 WRAP73Q9P2S5 460 aaPredicted RBP18.29■□□□□ 0.52
PCNX4-213ENST00000556907 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
PCNX4-213ENST00000556907 A0A087X0B3 334 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 PP2D1A8MPX8 630 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 ZNF202O95125 648 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 C22orf31O95567 290 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 CDC42EP1Q00587 391 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 MFSD5Q6N075 450 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 TRMT1LQ7Z2T5 733 aaKnown RBP18.28■□□□□ 0.52
PCNX4-213ENST00000556907 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 CABP7Q86V35 215 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 TMEM199Q8N511 208 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 SLC7A3Q8WY07 619 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 CDK5RAP3Q96JB5 506 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 CCDC43Q96MW1 224 aaKnown RBP18.28■□□□□ 0.52
PCNX4-213ENST00000556907 MMTAG2Q9BU76 263 aaKnown RBP18.28■□□□□ 0.52
PCNX4-213ENST00000556907 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
PCNX4-213ENST00000556907 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 MAFO75444 373 aaPredicted RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 DGAT1O75907 488 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 RFC2P35250 354 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 RARRES1P49788 294 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 DNM2P50570 870 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 E2F4Q16254 413 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 TRIM71Q2Q1W2 868 aaKnown RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 MTERF2Q49AM1 385 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 XKR9Q5GH70 373 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 IER5Q5VY09 327 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 FAM43BQ6ZT52 329 aaPredicted RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 ELOA2Q8IYF1 753 aaPredicted RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 DHX38Q92620 1227 aaKnown RBP18.27■□□□□ 0.52
PCNX4-213ENST00000556907 CEP89Q96ST8 783 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 ANP32EQ9BTT0 268 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 KIAA1024Q9UPX6 916 aa18.27■□□□□ 0.52
PCNX4-213ENST00000556907 POLR2DO15514 142 aaKnown RBP18.26■□□□□ 0.51
PCNX4-213ENST00000556907 ACTN4O43707 911 aaKnown RBP18.26■□□□□ 0.51
PCNX4-213ENST00000556907 CKBP12277 381 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 SELPP16109 830 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 THPOP40225 353 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 ZSCAN23Q3MJ62 389 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 KRBA2Q6ZNG9 492 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 TRAPPC12Q8WVT3 735 aa18.26■□□□□ 0.51
PCNX4-213ENST00000556907 DHX33Q9H6R0 707 aaKnown RBP18.26■□□□□ 0.51
PCNX4-213ENST00000556907 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
PCNX4-213ENST00000556907 M0QZ92 97 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 EYA4O95677 639 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 PFKMP08237 780 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 CDC25AP30304 524 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 POLGP54098 1239 aaPredicted RBP18.25■□□□□ 0.51
PCNX4-213ENST00000556907 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
PCNX4-213ENST00000556907 TMEM119Q4V9L6 283 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 PLA2G4FQ68DD2 849 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 POTEGQ6S5H5 508 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 LRRC8DQ7L1W4 858 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 RPUSD2Q8IZ73 545 aaKnown RBP18.25■□□□□ 0.51
PCNX4-213ENST00000556907 LINC01465Q8N7H1 131 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 TCP11Q8WWU5 503 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 PPP1R12CQ9BZL4 782 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 MAGEF1Q9HAY2 307 aa18.25■□□□□ 0.51
PCNX4-213ENST00000556907 EVPLQ92817 2033 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 ARHGEF35A5YM69 484 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 RSPH10B2B2RC85 870 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 H0YGN5 161 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 LETM1O95202 739 aaPredicted RBP18.24■□□□□ 0.51
PCNX4-213ENST00000556907 RSPH10BP0C881 870 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 SYN1P17600 705 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 CYP2C18P33260 490 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 NPEPPSP55786 919 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 PPIGQ13427 754 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCNX4-213ENST00000556907 ECM1Q16610 540 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 RUFY4Q6ZNE9 571 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 KIAA0319LQ8IZA0 1049 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 METTL13Q8N6R0 699 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 PDILTQ8N807 584 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 IQUBQ8NA54 791 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 MCPH1Q8NEM0 835 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 RASSF8Q8NHQ8 419 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 PIGOQ8TEQ8 1089 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 DHX58Q96C10 678 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 CUEDC2Q9H467 287 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 SQORQ9Y6N5 450 aa18.24■□□□□ 0.51
PCNX4-213ENST00000556907 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
PCNX4-213ENST00000556907 ASAP2O43150 1006 aa18.23■□□□□ 0.51
PCNX4-213ENST00000556907 SLFN14P0C7P3 912 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms