RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PCDHB12Q9Y5F1 795 aa16.77■□□□□ 0.28
CHD8-211ENST00000556833 COL1A2P08123 1366 aa16.77■□□□□ 0.27
CHD8-211ENST00000556833 C9IYK1 514 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 hCG_1984214I3L0E3 225 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 CHMP2AO43633 222 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 FGFR4P22455 802 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 NHLH1Q02575 133 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 NIPA1Q7RTP0 329 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 ZNF713Q8N859 430 aaPredicted RBP16.76■□□□□ 0.27
CHD8-211ENST00000556833 SMRP1Q8NCR6 262 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 BRF1Q92994 677 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
CHD8-211ENST00000556833 TLR9Q9NR96 1032 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
CHD8-211ENST00000556833 GPR182O15218 404 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 GPR32O75388 356 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
CHD8-211ENST00000556833 SLC24A5Q71RS6 500 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
CHD8-211ENST00000556833 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 CDH22Q9UJ99 828 aa16.75■□□□□ 0.27
CHD8-211ENST00000556833 CDC45O75419 566 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 EYA4O95677 639 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 PSAPP07602 524 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 CA8P35219 290 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 MRE11P49959 708 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 CRYBB1P53674 252 aaPredicted RBP16.74■□□□□ 0.27
CHD8-211ENST00000556833 NLRP11P59045 1033 aaKnown RBP16.74■□□□□ 0.27
CHD8-211ENST00000556833 PKN1Q16512 942 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 UGCGQ16739 394 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 EFCAB12Q6NXP0 572 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 BBXQ8WY36 941 aaPredicted RBP16.74■□□□□ 0.27
CHD8-211ENST00000556833 GLT8D2Q9H1C3 349 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 CWH43Q9H720 699 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 ENTPD7Q9NQZ7 604 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
CHD8-211ENST00000556833 CSDE1O75534 798 aaKnown RBP16.73■□□□□ 0.27
CHD8-211ENST00000556833 CYP3A4P08684 503 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
CHD8-211ENST00000556833 COASYQ13057 564 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 KRT32Q14532 448 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 ZNF746Q6NUN9 644 aaPredicted RBP16.73■□□□□ 0.27
CHD8-211ENST00000556833 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 SLC26A6Q9BXS9 759 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 ZMYND12Q9H0C1 365 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
CHD8-211ENST00000556833 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
CHD8-211ENST00000556833 MAFBQ9Y5Q3 323 aaPredicted RBP16.73■□□□□ 0.27
CHD8-211ENST00000556833 ZDBF2Q9HCK1 2354 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 KMT2EQ8IZD2 1858 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TMEM150BA6NC51 233 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TMEM221A6NGB7 291 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 HIDE1A8MVS5 230 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 M0R296 226 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 ZNF862O60290 1169 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TECP42680 631 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
CHD8-211ENST00000556833 PRKCEQ02156 737 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 DSC3Q14574 896 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 DUSP6Q16828 381 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 LONRF3Q496Y0 759 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 EDAQ92838 391 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 MAP7D2Q96T17 732 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TCF25Q9BQ70 676 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TBC1D22BQ9NU19 505 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 TMEM161AQ9NX61 479 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 PCDHA10Q9Y5I2 948 aa16.72■□□□□ 0.27
CHD8-211ENST00000556833 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 OATP04181 439 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 LAG3P18627 525 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
CHD8-211ENST00000556833 TSGA10IPQ3SY00 556 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 IER5LQ5T953 404 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 BLOC1S2Q6QNY1 142 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 SMAP1Q8IYB5 467 aaPredicted RBP16.71■□□□□ 0.27
CHD8-211ENST00000556833 ABI1Q8IZP0 508 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 PBXIP1Q96AQ6 731 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 LENG9Q96B70 501 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 CASD1Q96PB1 797 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
CHD8-211ENST00000556833 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 WDR64B1ANS9 1081 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 NT5C1B-RDH14C9J2C7 533 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 FSCN2O14926 492 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 MSH4O15457 936 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 ZSCAN20P17040 1043 aaPredicted RBP16.7■□□□□ 0.26
CHD8-211ENST00000556833 ZXDAP98168 799 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms