RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 BANK1Q8NDB2 785 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 PPM1EQ8WY54 764 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 ZNF689Q96CS4 500 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-224ENST00000556737 TBC1D32Q96NH3 1257 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 OSMRQ99650 979 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 NAP1L4Q99733 375 aaKnown RBP11.62□□□□□ -0.55
SHMT2-224ENST00000556737 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
SHMT2-224ENST00000556737 FTHL17Q9BXU8 183 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
SHMT2-224ENST00000556737 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 BRMS1Q9HCU9 246 aa11.62□□□□□ -0.55
SHMT2-224ENST00000556737 SEPT9Q9UHD8 586 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-224ENST00000556737 MUC3AQ02505 3323 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 IGKV6-21A0A0C4DH24 114 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 MAGEB2O15479 319 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-224ENST00000556737 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 DRP2Q13474 957 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-224ENST00000556737 XKR3Q5GH77 459 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 EFCAB12Q6NXP0 572 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 ANO5Q75V66 913 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 MICALL1Q8N3F8 863 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 METTL13Q8N6R0 699 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 SH2D3AQ9BRG2 576 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 SH2B1Q9NRF2 756 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-224ENST00000556737 GINS2Q9Y248 185 aa11.61□□□□□ -0.55
SHMT2-224ENST00000556737 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-224ENST00000556737 RPS6KA5O75582 802 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 DGKIO75912 1065 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
SHMT2-224ENST00000556737 GPC3P51654 580 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 PSMC5P62195 406 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 TRIM29Q14134 588 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 RABEP1Q15276 862 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 EPC2Q52LR7 807 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 PLA2G4FQ68DD2 849 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 NPAS4Q8IUM7 802 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 ZSCAN31Q96LW9 406 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-224ENST00000556737 SAMD11Q96NU1 681 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-224ENST00000556737 NRBP2Q9NSY0 501 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 THEGQ9P2T0 379 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 ST3GAL5Q9UNP4 418 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
SHMT2-224ENST00000556737 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 NEMFO60524 1076 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 SARSP49591 514 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 GATMP50440 423 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 NLRP11P59045 1033 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 TBC1D8BQ0IIM8 1120 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 DSC3Q14574 896 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 EPHA7Q15375 998 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 TMEM192Q8IY95 271 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 SLFN12Q8IYM2 578 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 CLP1Q92989 425 aaKnown RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 C8orf76Q96K31 380 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-224ENST00000556737 MTMR9Q96QG7 549 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 MAP7D2Q96T17 732 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 LXNQ9BS40 222 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 RGS18Q9NS28 235 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 LMCD1Q9NZU5 365 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 PLXNA4Q9HCM2 1894 aa11.59□□□□□ -0.55
SHMT2-224ENST00000556737 DDX11L8A8MPP1 907 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 C9IYK1 514 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 C5orf67F2Z3F1 127 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 H3BNC9 293 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 GPR182O15218 404 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 MAFO75444 373 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 TMOD1P28289 359 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 CTNNB1P35222 781 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 NPEPPSP55786 919 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 CALCRLQ16602 461 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 FAM43BQ6ZT52 329 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 C4orf19Q8IY42 314 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 FIBCD1Q8N539 461 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 DYDC2Q96IM9 177 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 ADAM2Q99965 735 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 TMEM60Q9H2L4 133 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 CYP26B1Q9NR63 512 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
SHMT2-224ENST00000556737 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.56
SHMT2-224ENST00000556737 DLL1O00548 723 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 FGFR4P22455 802 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 CYP4A11Q02928 519 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms