RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-222ENST00000556725 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 ASGR2P07307 311 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 WEE2P0C1S8 567 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 FGFR1P11362 822 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 PBX3P40426 434 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 ID4P47928 161 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 KRT76Q01546 638 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 HDAC1Q13547 482 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-222ENST00000556725 MTMR1Q13613 665 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 UBE2SQ16763 222 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
SYNE2-222ENST00000556725 PDE12Q6L8Q7 609 aaKnown RBP9.91□□□□□ -0.82
SYNE2-222ENST00000556725 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 FEZF2Q8TBJ5 459 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 RASGRP4Q8TDF6 673 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 TMEM40Q8WWA1 233 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 MRPS27Q92552 414 aaKnown RBP9.91□□□□□ -0.82
SYNE2-222ENST00000556725 TCF25Q9BQ70 676 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 RGS18Q9NS28 235 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 SORCS3Q9UPU3 1222 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 KDM3AQ9Y4C1 1321 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 RIF1Q5UIP0 2472 aaKnown RBP9.9□□□□□ -0.82
SYNE2-222ENST00000556725 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 DENND3A2RUS2 1198 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 PI15O43692 258 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 KLRC1P26715 233 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 WTAPQ15007 396 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 SLC24A5Q71RS6 500 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 UBALD2Q8IYN6 164 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 ADSSL1Q8N142 457 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 CMTR1Q8N1G2 835 aaKnown RBP9.9□□□□□ -0.82
SYNE2-222ENST00000556725 NME8Q8N427 588 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 CYP2W1Q8TAV3 490 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 IGDCC4Q8TDY8 1250 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 CDHR1Q96JP9 859 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 PPP1R16BQ96T49 567 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 MYL10Q9BUA6 226 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 OSBPL3Q9H4L5 887 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 JADE2Q9NQC1 790 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 RNF19AQ9NV58 838 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 SLC9A2Q9UBY0 812 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 NR2E1Q9Y466 385 aa9.9□□□□□ -0.82
SYNE2-222ENST00000556725 FAM186AA6NE01 2351 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 hCG_1642624A0A1W2PR95 340 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 RPLP2P05387 115 aaKnown RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 CYP21A2P08686 494 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 HOXB8P17481 243 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PDE4AP27815 886 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 STAT5BP51692 787 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 ANTXR2P58335 489 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 ACTR2P61160 394 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 FAM189BP81408 668 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PTH1RQ03431 593 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 TRDNQ13061 729 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 KCNT2Q6UVM3 1135 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 ERMP1Q7Z2K6 904 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 CATIPQ7Z7H3 387 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 KIAA0319LQ8IZA0 1049 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 SRBD1Q8N5C6 995 aaKnown RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 C12orf76Q8N812 135 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 NKD2Q969F2 451 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 RRP36Q96EU6 259 aaKnown RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 CASD1Q96PB1 797 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 SPZ1Q9BXG8 430 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 ADAM7Q9H2U9 754 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 AZI2Q9H6S1 392 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PSTPIP2Q9H939 334 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 JPH1Q9HDC5 661 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PCDHA6Q9UN73 950 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 LZTS1Q9Y250 596 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 PCDHA8Q9Y5H6 950 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 HCFC2Q9Y5Z7 792 aa9.89□□□□□ -0.83
SYNE2-222ENST00000556725 ERICH2A1L162 156 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 FSD2A1L4K1 749 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 E7EWF7 191 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 HIP1O00291 1037 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 MAFGO15525 162 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 PLEKHA8P1O95397 391 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 SRGAP2BP0DMP2 458 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 LAG3P18627 525 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 DSC3Q14574 896 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 KIZQ2M2Z5 673 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 PLPPR4Q7Z2D5 763 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 FAM228AQ86W67 206 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 CHD1LQ86WJ1 897 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 SMC5Q8IY18 1101 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 MRPL43Q8N983 215 aaKnown RBP9.88□□□□□ -0.83
SYNE2-222ENST00000556725 ATP6V0A4Q9HBG4 840 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 NGRNQ9NPE2 291 aaKnown RBP9.88□□□□□ -0.83
SYNE2-222ENST00000556725 KCNH7Q9NS40 1196 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 C1orf112Q9NSG2 853 aa9.88□□□□□ -0.83
SYNE2-222ENST00000556725 TMEM161AQ9NX61 479 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms