RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 FGD5Q6ZNL6 1462 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 DDX3XO00571 662 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCNX1-212ENST00000556516 H2AFYO75367 372 aaKnown RBP6.28□□□□□ -1.4
PCNX1-212ENST00000556516 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 ERVK-21P61565 698 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 TRMT10BQ6PF06 316 aaKnown RBP6.28□□□□□ -1.4
PCNX1-212ENST00000556516 NECAB2Q7Z6G3 386 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 RASSF3Q86WH2 238 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 CXorf67Q86X51 503 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-212ENST00000556516 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 MAML3Q96JK9 1138 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 FOXB1Q99853 325 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 CDC42EP3Q9UKI2 254 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 CUX2O14529 1486 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 GOLGA3Q08378 1498 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 MRC2Q9UBG0 1479 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 PRDM2Q13029 1718 aa6.28□□□□□ -1.4
PCNX1-212ENST00000556516 GOLGA8AA7E2F4 631 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 GOLGA8BA8MQT2 603 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 ALG1L2C9J202 215 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 FFAR3O14843 346 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 LPLP06858 475 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 COL6A1P12109 1028 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 ROM1Q03395 351 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 WDR72Q3MJ13 1102 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 GPR158Q5T848 1215 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 KANK2Q63ZY3 851 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 FRMD7Q6ZUT3 714 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 ZZZ3Q8IYH5 903 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 TTLL6Q8N841 843 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 DACT3Q96B18 629 aaPredicted RBP6.27□□□□□ -1.41
PCNX1-212ENST00000556516 FMNL2Q96PY5 1086 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 SPATA25Q9BR10 227 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 OR10A5Q9H207 317 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 CARMIL1Q5VZK9 1371 aa6.27□□□□□ -1.41
PCNX1-212ENST00000556516 RUSC2Q8N2Y8 1516 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PRSS38A1L453 326 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 GABRDO14764 452 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 NUAK1O60285 661 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PCDH8O95206 1070 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 C8AP07357 584 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 MYBL2P10244 700 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 MANFP55145 182 aaKnown RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 ADCY2Q08462 1091 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 ADCY1Q08828 1119 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PKN1Q16512 942 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PLEKHG6Q3KR16 790 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 ESPNLQ6ZVH7 1005 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 SAPCD2Q86UD0 394 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 RAVER1Q8IY67 606 aaKnown RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 CBARPQ8N350 705 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 NUDT10Q8NFP7 164 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 NUDT11Q96G61 164 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 SCYL1Q96KG9 808 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 BTBD2Q9BX70 525 aa6.26□□□□□ -1.41
PCNX1-212ENST00000556516 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 QRSL1Q9H0R6 528 aaKnown RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 POLA1P09884 1462 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-212ENST00000556516 URB2Q14146 1524 aaKnown RBP6.25□□□□□ -1.41
PCNX1-212ENST00000556516 ABCA10Q8WWZ4 1543 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 RFXAPO00287 272 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 KNG1P01042 644 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 CELA3BP08861 270 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 ZNF28P17035 718 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 IL13P35225 146 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 MOGSQ13724 837 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 SYDE2Q5VT97 1194 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 NME9Q86XW9 330 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 WDR48Q8TAF3 677 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
PCNX1-212ENST00000556516 MTG2Q9H4K7 406 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 TNKSO95271 1327 aa6.25□□□□□ -1.41
PCNX1-212ENST00000556516 TDRD9Q8NDG6 1382 aaKnown RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 APEX1P27695 318 aaKnown RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 GPR3P46089 330 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 STAT5BP51692 787 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 ANTXR2P58335 489 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 CCT2P78371 535 aaKnown RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 SRSF2Q01130 221 aaKnown RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 TRIM25Q14258 630 aaKnown RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 STILQ15468 1287 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 ZNF385BQ569K4 471 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 PITRM1Q5JRX3 1037 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 KIAA1841Q6NSI8 718 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 TIGD7Q6NT04 549 aaPredicted RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 OTOP2Q7RTS6 562 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 GPR155Q7Z3F1 870 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 TP53I13Q8NBR0 393 aaPredicted RBP6.24□□□□□ -1.41
PCNX1-212ENST00000556516 CALML6Q8TD86 181 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 LMBR1Q8WVP7 490 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 E2F7Q96AV8 911 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
PCNX1-212ENST00000556516 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms