RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
SRP54-211ENST00000556445 LMOD3Q0VAK6 560 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 OS9Q13438 667 aaPredicted RBP6.29□□□□□ -1.4
SRP54-211ENST00000556445 B3GNT8Q7Z7M8 397 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 DCP2Q8IU60 420 aaKnown RBP6.29□□□□□ -1.4
SRP54-211ENST00000556445 RIOX2Q8IUF8 465 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
SRP54-211ENST00000556445 CPA5Q8WXQ8 436 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 KCNC2Q96PR1 638 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 TRIM55Q9BYV6 548 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 ARHGEF4Q9NR80 690 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 POLKQ9UBT6 870 aa6.29□□□□□ -1.4
SRP54-211ENST00000556445 NRKQ7Z2Y5 1582 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 SGSM2O43147 1006 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 PLIN1O60240 522 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 INHBBP09529 407 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 KCNA6P17658 529 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 SLC6A11P48066 632 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 GTF2A2P52657 109 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 HTRA3P83110 453 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 VPS72Q15906 364 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 VMACQ2NL98 169 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 CEP68Q76N32 757 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 HOMER1Q86YM7 354 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 AMOTL1Q8IY63 956 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 MARCH10Q8NA82 808 aaPredicted RBP6.28□□□□□ -1.4
SRP54-211ENST00000556445 TP53I13Q8NBR0 393 aaPredicted RBP6.28□□□□□ -1.4
SRP54-211ENST00000556445 KCTD13Q8WZ19 329 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 SWAP70Q9UH65 585 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 SFMBT1Q9UHJ3 866 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 FBXO9Q9UK97 447 aaPredicted RBP6.28□□□□□ -1.4
SRP54-211ENST00000556445 LRRC7Q96NW7 1537 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 KIF24Q5T7B8 1368 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 FMN2Q9NZ56 1722 aa6.28□□□□□ -1.4
SRP54-211ENST00000556445 OVOS2A0A0J9YW53 1432 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 OVOS2Q6IE36 1432 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 ADGRL3Q9HAR2 1447 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 IQCA1LA6NCM1 817 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
SRP54-211ENST00000556445 FFAR3O14843 346 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 MYO1BO43795 1136 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 CAND2O75155 1236 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 BMP7P18075 431 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 TMPOP42166 694 aaKnown RBP6.27□□□□□ -1.41
SRP54-211ENST00000556445 HSP90AA2PQ14568 343 aaPredicted RBP6.27□□□□□ -1.41
SRP54-211ENST00000556445 VWA3BQ502W6 1294 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 MROH9Q5TGP6 573 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 NME9Q86XW9 330 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 CNPY4Q8N129 248 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 FNIP1Q8TF40 1166 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 SEC14L1Q92503 715 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
SRP54-211ENST00000556445 PKNOX2Q96KN3 472 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 AARSD1Q9BTE6 412 aaKnown RBP6.27□□□□□ -1.41
SRP54-211ENST00000556445 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 PARD6AQ9NPB6 346 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 JADE2Q9NQC1 790 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 RAPGEFL1Q9UHV5 662 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 PCDHA2Q9Y5H9 948 aa6.27□□□□□ -1.41
SRP54-211ENST00000556445 SSH2Q76I76 1423 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 NCOA3Q9Y6Q9 1424 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 NALCNQ8IZF0 1738 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 H7BY64 318 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 FGFR1P11362 822 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 DLX2Q07687 328 aaPredicted RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 CACNB2Q08289 660 aaPredicted RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 LSAMPQ13449 338 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 HDAC1Q13547 482 aaPredicted RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 NFE2Q16621 373 aaPredicted RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 BRDTQ58F21 947 aaPredicted RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 KRT26Q7Z3Y9 468 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 MIB1Q86YT6 1006 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 WDR75Q8IWA0 830 aaKnown RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 LINC01356Q8N9X3 169 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 SMARCC2Q8TAQ2 1214 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 TMEM169Q96HH4 297 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 MPHOSPH6Q99547 160 aaKnown RBP6.26□□□□□ -1.41
SRP54-211ENST00000556445 AP5M1Q9H0R1 490 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 TMEM260Q9NX78 707 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 NWD1Q149M9 1564 aa6.26□□□□□ -1.41
SRP54-211ENST00000556445 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 PRODHO43272 600 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 TSPAN6O43657 245 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 MSCO60682 206 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 FGAP02671 866 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 C8BP07358 591 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 PABPC1P11940 636 aaKnown RBP6.25□□□□□ -1.41
SRP54-211ENST00000556445 HOXA5P20719 270 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 IL13P35225 146 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 CDKN1CP49918 316 aaPredicted RBP6.25□□□□□ -1.41
SRP54-211ENST00000556445 RIPK4P57078 832 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 NTRK3Q16288 839 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms