RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 COL1A2P08123 1366 aa10.13□□□□□ -0.79
LINC00520-204ENST00000556417 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 GOLGA8AA7E2F4 631 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 GOLGA8BA8MQT2 603 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 FGF18O76093 207 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 VTNP04004 478 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 MRE11P49959 708 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 KCNC3Q14003 757 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 DSC3Q14574 896 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 PFKFB3Q16875 520 aaPredicted RBP10.12□□□□□ -0.79
LINC00520-204ENST00000556417 BMP2KLQ5H9B9 411 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 ODR4Q5SWX8 454 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 TRMT1LQ7Z2T5 733 aaKnown RBP10.12□□□□□ -0.79
LINC00520-204ENST00000556417 BMP8AQ7Z5Y6 402 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
LINC00520-204ENST00000556417 PPP1R16BQ96T49 567 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 OSMRQ99650 979 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 ZNF577Q9BSK1 485 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 ZMYND12Q9H0C1 365 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 ELAC1Q9H777 363 aaKnown RBP10.12□□□□□ -0.79
LINC00520-204ENST00000556417 TLR9Q9NR96 1032 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 AAASQ9NRG9 546 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 TBC1D22BQ9NU19 505 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
LINC00520-204ENST00000556417 USP15Q9Y4E8 981 aaPredicted RBP10.12□□□□□ -0.79
LINC00520-204ENST00000556417 ATG2AQ2TAZ0 1938 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 FSCN2O14926 492 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 EDIL3O43854 480 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 FGFR1P11362 822 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 RCAN1P53805 252 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 PKN1Q16512 942 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 DUSP6Q16828 381 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 SPOUT1Q5T280 376 aaKnown RBP10.11□□□□□ -0.79
LINC00520-204ENST00000556417 IER5LQ5T953 404 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 ZNF746Q6NUN9 644 aaPredicted RBP10.11□□□□□ -0.79
LINC00520-204ENST00000556417 TMEM184AQ6ZMB5 413 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 LRRC55Q6ZSA7 311 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
LINC00520-204ENST00000556417 METTL13Q8N6R0 699 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 COLGALT1Q8NBJ5 622 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 SUSD6Q92537 303 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
LINC00520-204ENST00000556417 ATP6V0A4Q9HBG4 840 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 PCDHA10Q9Y5I2 948 aa10.11□□□□□ -0.79
LINC00520-204ENST00000556417 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 TMEM221A6NGB7 291 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 M0R296 226 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 PSAPP07602 524 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 ATF7P17544 494 aaPredicted RBP10.1□□□□□ -0.79
LINC00520-204ENST00000556417 CLCN3P51790 818 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 NLRP11P59045 1033 aaKnown RBP10.1□□□□□ -0.79
LINC00520-204ENST00000556417 ZXDAP98168 799 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 SETQ01105 290 aaPredicted RBP10.1□□□□□ -0.79
LINC00520-204ENST00000556417 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 APOBRQ0VD83 1088 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 PDE12Q6L8Q7 609 aaKnown RBP10.1□□□□□ -0.79
LINC00520-204ENST00000556417 THNSL1Q8IYQ7 743 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 LINC01465Q8N7H1 131 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 PBXIP1Q96AQ6 731 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 LENG9Q96B70 501 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 CCDC136Q96JN2 1154 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 CASD1Q96PB1 797 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 CDCA3Q99618 268 aaPredicted RBP10.1□□□□□ -0.79
LINC00520-204ENST00000556417 TMEM117Q9H0C3 514 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 S1PR5Q9H228 398 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 ADAMTS10Q9H324 1103 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 RNF19AQ9NV58 838 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 GABBR1Q9UBS5 961 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 CEP131Q9UPN4 1083 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 LZTS1Q9Y250 596 aa10.1□□□□□ -0.79
LINC00520-204ENST00000556417 MYO7AQ13402 2215 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 HIDE1A8MVS5 230 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 MAGEB2O15479 319 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 ZNF862O60290 1169 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 HMGB1P09429 215 aaKnown RBP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 CPA1P15085 419 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 LAG3P18627 525 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 EIF4BP23588 611 aaKnown RBP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 CIITAP33076 1130 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 PBX3P40426 434 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 METAP2P50579 478 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 KRT32Q14532 448 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 NTRK3Q16288 839 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 PRR16Q569H4 304 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 MCTP2Q6DN12 878 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 EFCAB12Q6NXP0 572 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 SYCE2Q6PIF2 218 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 KCNT2Q6UVM3 1135 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 Q6ZUG5 572 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 REXO1Q8N1G1 1221 aaKnown RBP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 LRRC71Q8N4P6 559 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 PRSS33Q8NF86 280 aa10.09□□□□□ -0.79
LINC00520-204ENST00000556417 MRPS27Q92552 414 aaKnown RBP10.09□□□□□ -0.79
LINC00520-204ENST00000556417 TCF25Q9BQ70 676 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms