RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 MAGEF1Q9HAY2 307 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 ATP6V0A4Q9HBG4 840 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 KCND2Q9NZV8 630 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 WRAP73Q9P2S5 460 aaPredicted RBP8.5□□□□□ -1.05
TDP1-214ENST00000556063 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 KCNH3Q9ULD8 1083 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 NR2E3Q9Y5X4 410 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 E9PMD0 336 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 M0QZ92 97 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 ASAP2O43150 1006 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 TREHO43280 583 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 B4GALT4O60513 344 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 MAFO75444 373 aaPredicted RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 C22orf31O95567 290 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 CD4P01730 458 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 KRT18P05783 430 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 PLA2G4BP0C869 781 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 CYP11B2P19099 503 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 UBE2HP62256 183 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 ADAM17P78536 824 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 EMC2Q15006 297 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 ECM1Q16610 540 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 IER5Q5VY09 327 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 EFCAB12Q6NXP0 572 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 SV2BQ7L1I2 683 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 RPAINQ86UA6 219 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 CEP57L1Q8IYX8 460 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 SYT2Q8N9I0 419 aaPredicted RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 TRAPPC12Q8WVT3 735 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 LARP4BQ92615 738 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 RAD54LQ92698 747 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 DHX58Q96C10 678 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 MTRQ99707 1265 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 PANK2Q9BZ23 570 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 TRPV6Q9H1D0 765 aa8.49□□□□□ -1.05
TDP1-214ENST00000556063 DHX33Q9H6R0 707 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 TRMT13Q9NUP7 481 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 HOOK1Q9UJC3 728 aaKnown RBP8.49□□□□□ -1.05
TDP1-214ENST00000556063 A0A087WWV3 80 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 FAM237AA0A1B0GTK4 181 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 A0A1B0GVL5 298 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 TMEM150BA6NC51 233 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 ZBTB42B2RXF5 422 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 ZBTB39O15060 712 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 USO1O60763 962 aaKnown RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 RAG1P15918 1043 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 PFKFB1P16118 471 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 THPOP40225 353 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 TFDP1Q14186 410 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 DHX8Q14562 1220 aaKnown RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 MXD4Q14582 209 aaPredicted RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 MARCH8Q5T0T0 291 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 KANK3Q6NY19 840 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 KCNK18Q7Z418 384 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 GPBP1Q86WP2 473 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 PPP1R13LQ8WUF5 828 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 PSPC1Q8WXF1 523 aaKnown RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 KIFAP3Q92845 792 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 DRC1Q96MC2 740 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 SCLT1Q96NL6 688 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 SH2D3AQ9BRG2 576 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 FAM49AQ9H0Q0 323 aaPredicted RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 TNMDQ9H2S6 317 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 PRDM5Q9NQX1 630 aaPredicted RBP8.48□□□□□ -1.05
TDP1-214ENST00000556063 AKT3Q9Y243 479 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 CEP290O15078 2479 aa8.48□□□□□ -1.05
TDP1-214ENST00000556063 IGKV6-21A0A0C4DH24 114 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 KIAA0355O15063 1070 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 KINO60870 393 aaKnown RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 TBCAO75347 108 aaKnown RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 SELPP16109 830 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 PTMSP20962 102 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 RGS19P49795 217 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 NDUFA8P51970 172 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 SLC12A3P55017 1021 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 MRPS6P82932 125 aaKnown RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 FAM160A1Q05DH4 1040 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 RBL2Q08999 1139 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 MCM6Q14566 821 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 ODR4Q5SWX8 454 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 FAM102BQ5T8I3 360 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 RINT1Q6NUQ1 792 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 FAM43BQ6ZT52 329 aaPredicted RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 C7orf61Q8IZ16 206 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 KIAA0319LQ8IZA0 1049 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 LRRC71Q8N4P6 559 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 DNAJB3Q8WWF6 145 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms