RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 BMT2Q1RMZ1 405 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 ABCB5Q2M3G0 1257 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 SYDE2Q5VT97 1194 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 ALKBH5Q6P6C2 394 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 STXBP4Q6ZWJ1 553 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EPM2AIP1Q7L775 607 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 MREGQ8N565 214 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GMCL1P1Q8NEA9 526 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PPM1EQ8WY54 764 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CCDC43Q96MW1 224 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 INPP4AQ96PE3 977 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 POLR3CQ9BUI4 534 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 PACSIN1Q9BY11 444 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GCNT4Q9P109 453 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 FBXL5Q9UKA1 691 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 SIPA1L1O43166 1804 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GTPBP10A4D1E9 387 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 TMCO5BA8MYB1 307 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 F5H6K3 240 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PGRMC1O00264 195 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 TRIM66O15016 1216 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EIF3HO15372 352 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-213ENST00000555880 CEP104O60308 925 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 FAM13AO94988 1023 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 KIF4AO95239 1232 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EYA4O95677 639 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 MMP10P09238 476 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 H2AFZP0C0S5 128 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CCDC172P0C7W6 258 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 SPATA31C1P0DKV0 1188 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 MYBP10242 640 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 ACTN1P12814 892 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 SLC9A1P19634 815 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PRKCIP41743 596 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 MAGEA9P43362 315 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CARSP49589 748 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 PSMC6P62333 389 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 HDLBPQ00341 1268 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 CYP4A11Q02928 519 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 KLRC3Q07444 240 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-213ENST00000555880 EPHA7Q15375 998 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 THSD4Q6ZMP0 1018 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 H2AFVQ71UI9 128 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 ZNF571Q7Z3V5 609 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 PEX26Q7Z412 305 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PODNQ7Z5L7 613 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 IRF2BP2Q7Z5L9 587 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 TEX2Q8IWB9 1127 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EFCAB13Q8IY85 973 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EIF1ADQ8N9N8 165 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 CRYGNQ8WXF5 182 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CALR3Q96L12 384 aaKnown RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 ZIM3Q96PE6 472 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 BHMT2Q9H2M3 363 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 TAF1DQ9H5J8 278 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 OLFML3Q9NRN5 406 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 STK32BQ9NY57 414 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 NAGPAQ9UK23 515 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 INTUQ9ULD6 942 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PACSIN2Q9UNF0 486 aaPredicted RBP7.64□□□□□ -1.19
TDP1-213ENST00000555880 A0A0A6YYK5 440 aaPredicted RBP7.63□□□□□ -1.19
TDP1-213ENST00000555880 ESYT3A0FGR9 886 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 FAM196BA6NMK8 535 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 ASTN1O14525 1302 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 EIF3DO15371 548 aaKnown RBP eCLIP7.63□□□□□ -1.19
TDP1-213ENST00000555880 MSH4O15457 936 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 AKAP3O75969 853 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 GFPT2O94808 682 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 BMP3P12645 472 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 CIITAP33076 1130 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 PSMC2P35998 433 aaKnown RBP7.63□□□□□ -1.19
TDP1-213ENST00000555880 STAT1P42224 750 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 GUCY2FP51841 1108 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 CORO7P57737 925 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 RNASE9P60153 205 aaKnown RBP7.63□□□□□ -1.19
TDP1-213ENST00000555880 SKOR1P84550 965 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 MAATS1Q7Z4T9 603 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 LOXHD1Q8IVV2 1947 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 ZFPM1Q8IX07 1006 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 KLHL7Q8IXQ5 586 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 ACTRT1Q8TDG2 376 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 BCAS4Q8TDM0 211 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 WNT2BQ93097 391 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 LENG9Q96B70 501 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 MASTLQ96GX5 879 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 EIF2AK1Q9BQI3 630 aaKnown RBP7.63□□□□□ -1.19
TDP1-213ENST00000555880 MRIQ9BWK5 157 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 IDI2Q9BXS1 227 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 PLEKHA4Q9H4M7 779 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 DNAJC18Q9H819 358 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 EHMT1Q9H9B1 1298 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 NRXN2Q9P2S2 1712 aa7.63□□□□□ -1.19
TDP1-213ENST00000555880 UBE4BO95155 1302 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 DDTLA6NHG4 134 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms