RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 NACC1Q96RE7 527 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 ZSCAN16Q9H4T2 348 aaPredicted RBP25.56■■□□□ 1.68
CDKN3-208ENST00000555837 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.56■■□□□ 1.68
CDKN3-208ENST00000555837 RGL1Q9NZL6 768 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 LRWD1Q9UFC0 647 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 GINS2Q9Y248 185 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 RPS6KA5O75582 802 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 RPA1P27694 616 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 TOB1P50616 345 aaPredicted RBP25.55■■□□□ 1.68
CDKN3-208ENST00000555837 TMEM62Q0P6H9 643 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 CTTNQ14247 550 aaKnown RBP25.55■■□□□ 1.68
CDKN3-208ENST00000555837 XKR9Q5GH70 373 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 KCTD17Q8N5Z5 321 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 PBX4Q9BYU1 374 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 PCDHB6Q9Y5E3 794 aa25.55■■□□□ 1.68
CDKN3-208ENST00000555837 POTEMA6NI47 508 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 WNT7AO00755 349 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 ASAP2O43150 1006 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 TLL1O43897 1013 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 STBD1O95210 358 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 SYT1P21579 422 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 CLCN3P51790 818 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 KRT79Q5XKE5 535 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 ZNF410Q86VK4 478 aa25.54■■□□□ 1.68
CDKN3-208ENST00000555837 IGKV6-21A0A0C4DH24 114 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 DGAT1O75907 488 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 NLRP11P59045 1033 aaKnown RBP25.53■■□□□ 1.68
CDKN3-208ENST00000555837 LRRC71Q8N4P6 559 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 LINC01465Q8N7H1 131 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 C4orf32Q8N8J7 132 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 ZBTB10Q96DT7 871 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 RAD9AQ99638 391 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 GCOM2Q9BZD3 368 aaPredicted RBP25.53■■□□□ 1.68
CDKN3-208ENST00000555837 INSL6Q9Y581 213 aa25.53■■□□□ 1.68
CDKN3-208ENST00000555837 VTNP04004 478 aa25.52■■□□□ 1.68
CDKN3-208ENST00000555837 ATP2C1P98194 919 aaPredicted RBP25.52■■□□□ 1.68
CDKN3-208ENST00000555837 NLRP7Q8WX94 980 aa25.52■■□□□ 1.68
CDKN3-208ENST00000555837 PSPC1Q8WXF1 523 aaKnown RBP25.52■■□□□ 1.68
CDKN3-208ENST00000555837 DHX33Q9H6R0 707 aaKnown RBP25.52■■□□□ 1.68
CDKN3-208ENST00000555837 SUCLA2Q9P2R7 463 aaPredicted RBP25.52■■□□□ 1.68
CDKN3-208ENST00000555837 PADI3Q9ULW8 664 aa25.52■■□□□ 1.68
CDKN3-208ENST00000555837 SLC26A4O43511 780 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 STX6O43752 255 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 GJB5O95377 273 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 STAG3L1P0CL83 205 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 EIF4BP23588 611 aaKnown RBP25.51■■□□□ 1.67
CDKN3-208ENST00000555837 NFX1Q12986 1120 aaKnown RBP25.51■■□□□ 1.67
CDKN3-208ENST00000555837 MXD4Q14582 209 aaPredicted RBP25.51■■□□□ 1.67
CDKN3-208ENST00000555837 KIZQ2M2Z5 673 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 PLA2G4FQ68DD2 849 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 MYOCDQ8IZQ8 938 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 IGSF22Q8N9C0 903 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 AK8Q96MA6 479 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 MTRQ99707 1265 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 C1orf112Q9NSG2 853 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 DBR1Q9UK59 544 aaKnown RBP25.51■■□□□ 1.67
CDKN3-208ENST00000555837 TET1Q8NFU7 2136 aa25.51■■□□□ 1.67
CDKN3-208ENST00000555837 GPR32O75388 356 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 CD52P31358 61 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 CCT6AP40227 531 aaKnown RBP25.5■■□□□ 1.67
CDKN3-208ENST00000555837 PPP2R2DQ66LE6 453 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 CATSPER3Q86XQ3 398 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 MCPH1Q8NEM0 835 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 OSMRQ99650 979 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 SEMA6BQ9H3T3 888 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 ZNF576Q9H609 170 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 ATP6V0A4Q9HBG4 840 aa25.5■■□□□ 1.67
CDKN3-208ENST00000555837 EVPLQ92817 2033 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 DENND3A2RUS2 1198 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 GRXCR1A8MXD5 290 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 ZSCAN20P17040 1043 aaPredicted RBP25.49■■□□□ 1.67
CDKN3-208ENST00000555837 SFPQP23246 707 aaKnown RBP eCLIP25.49■■□□□ 1.67
CDKN3-208ENST00000555837 GPC3P51654 580 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 NPEPPSP55786 919 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 TFDP1Q14186 410 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 BECN1Q14457 450 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 NBR1Q14596 966 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 PCBP1Q15365 356 aaKnown RBP eCLIP25.49■■□□□ 1.67
CDKN3-208ENST00000555837 RHPN2Q8IUC4 686 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 TOP1MTQ969P6 601 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 CEP89Q96ST8 783 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 NT5C3AQ9H0P0 336 aa25.49■■□□□ 1.67
CDKN3-208ENST00000555837 EMC2Q15006 297 aa25.48■■□□□ 1.67
CDKN3-208ENST00000555837 SNX29Q8TEQ0 813 aa25.48■■□□□ 1.67
CDKN3-208ENST00000555837 AGO3Q9H9G7 860 aaKnown RBP25.48■■□□□ 1.67
CDKN3-208ENST00000555837 WRAP73Q9P2S5 460 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-208ENST00000555837 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-208ENST00000555837 COL4A3BPQ9Y5P4 624 aa25.48■■□□□ 1.67
CDKN3-208ENST00000555837 ENPP3O14638 875 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 SPATA31C1P0DKV0 1188 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 DARSP14868 501 aaKnown RBP25.47■■□□□ 1.67
CDKN3-208ENST00000555837 RARRES1P49788 294 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 DEFB103AP81534 67 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 NCBP1Q09161 790 aaKnown RBP25.47■■□□□ 1.67
CDKN3-208ENST00000555837 MKRN4PQ13434 485 aaPredicted RBP25.47■■□□□ 1.67
CDKN3-208ENST00000555837 CDK5RAP3Q96JB5 506 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 YME1L1Q96TA2 773 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 TSPYL2Q9H2G4 693 aaPredicted RBP25.47■■□□□ 1.67
CDKN3-208ENST00000555837 ADAMTS10Q9H324 1103 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 FOXD4L1Q9NU39 408 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms