RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	KIAA1841	Q6NSI8	718 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	KANSL1	Q7Z3B3	1105 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	FERMT2	Q96AC1	680 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	GORASP1	Q9BQQ3	440 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	RHOBTB2	Q9BYZ6	727 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	DLL4	Q9NR61	685 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	DNAJC28	Q9NX36	388 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	IP6K2	Q9UHH9	426 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ZNF180	Q9UJW8	692 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	EDAR	Q9UNE0	448 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	E2F8	A0AVK6	867 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	LRRC10B	A6NIK2	292 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	XPOT	O43592	962 aa	Known RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	SNUPN	O95149	360 aa	Known RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	IL18BP	O95998	194 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	LPL	P06858	475 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	PFKL	P17858	780 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ECE1	P42892	770 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	GLRB	P48167	497 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	SRSF2	Q01130	221 aa	Known RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	RTP5	Q14D33	572 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	UGT8	Q16880	541 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	TOR2A	Q5JU69	321 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	PNMA8A	Q86V59	439 aa	Predicted RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ZSWIM3	Q96MP5	696 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	TMEM209	Q96SK2	561 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	QRSL1	Q9H0R6	528 aa	Known RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	GCM1	Q9NP62	436 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	FAM53C	Q9NYF3	392 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ARHGAP20	Q9P2F6	1191 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	TMPRSS11E	Q9UL52	423 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	FAN1	Q9Y2M0	1017 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ZSCAN20	P17040	1043 aa	Predicted RBP	6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	KRT85	P78386	507 aa		6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	ADAM9	Q13443	819 aa		6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.21	□□□□□ -1.42	5e-13	■■■■■ 83.1
KTN1-223	ENST00000555573	TTLL7	Q6ZT98	887 aa		6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	CALML6	Q8TD86	181 aa		6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	TACO1	Q9BSH4	297 aa	Known RBP	6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	LUC7L	Q9NQ29	371 aa	Known RBP	6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	ZFP69B	Q9UJL9	534 aa		6.21	□□□□□ -1.42
KTN1-223	ENST00000555573	N4BP3	O15049	544 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	RECQL	P46063	649 aa	Predicted RBP	6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	IL13RA1	P78552	427 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	FOXO4	P98177	505 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	ACAP2	Q15057	778 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	LYSMD2	Q8IV50	215 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	WDR75	Q8IWA0	830 aa	Known RBP	6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	CHPF	Q8IZ52	775 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	JPH3	Q8WXH2	748 aa	Predicted RBP	6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	NOX5	Q96PH1	765 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	BTBD2	Q9BX70	525 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	OR10A5	Q9H207	317 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	MRFAP1	Q9Y605	127 aa		6.2	□□□□□ -1.42
KTN1-223	ENST00000555573	ST20-MTHFS	A0A0A6YYL1	179 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KLHL33	A6NCF5	533 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	SEMA7A	O75326	666 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	OSM	P13725	252 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	TAL1	P17542	331 aa	Predicted RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	LIMS1	P48059	325 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	MTNR1B	P49286	362 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	TRIM25	Q14258	630 aa	Known RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	HSP90AB2P	Q58FF8	381 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	NOL8	Q76FK4	1167 aa	Known RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KCNK18	Q7Z418	384 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	CPA6	Q8N4T0	437 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	STPG3	Q8N7X2	389 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	JADE3	Q92613	823 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KCTD10	Q9H3F6	313 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	MTG2	Q9H4K7	406 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	NOB1	Q9ULX3	412 aa	Known RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	INVS	Q9Y283	1065 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	MYPN	Q86TC9	1320 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	PRPF3	O43395	683 aa	Known RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	PCDH8	O95206	1070 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	PFKM	P08237	780 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	APEX1	P27695	318 aa	Known RBP	6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	HTRA3	P83110	453 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KANK2	Q63ZY3	851 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KRTAP5-3	Q6L8H2	238 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	TEKT5	Q96M29	485 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	SLC2A13	Q96QE2	648 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	CAMKK2	Q96RR4	588 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	WNT8A	Q9H1J5	351 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	TCF7L1	Q9HCS4	588 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	KCND1	Q9NSA2	647 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	DENND2A	Q9ULE3	1009 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	GPR45	Q9Y5Y3	372 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	NUMBL	Q9Y6R0	609 aa		6.19	□□□□□ -1.42
KTN1-223	ENST00000555573	CELA3B	P08861	270 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	PF4V1	P10720	104 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	AGXT	P21549	392 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	LGALS4	P56470	323 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	DLG4	P78352	724 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	MRPS9	P82933	396 aa	Known RBP	6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	STIL	Q15468	1287 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	TMEM240	Q5SV17	173 aa		6.18	□□□□□ -1.42
KTN1-223	ENST00000555573	CMTR2	Q8IYT2	770 aa	Known RBP	6.18	□□□□□ -1.42

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