RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 DBR1Q9UK59 544 aaKnown RBP9.58□□□□□ -0.88
NEK9-206ENST00000555537 MAFGO15525 162 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 VTNP04004 478 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 EPCAMP16422 314 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 RXRAP19793 462 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 MTHFRP42898 656 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 METAP2P50579 478 aaKnown RBP eCLIP9.57□□□□□ -0.88
NEK9-206ENST00000555537 ANTXR2P58335 489 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 PTH1RQ03431 593 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 ITGB3BPQ13352 177 aaPredicted RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 HDAC1Q13547 482 aaPredicted RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 SMC1AQ14683 1233 aaKnown RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 ATAT1Q5SQI0 421 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 TMC5Q6UXY8 1006 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 RAB11FIP4Q86YS3 637 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 CCDC82Q8N4S0 544 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 TDRD5Q8NAT2 981 aaKnown RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 DTWD2Q8NBA8 298 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 TNPO1Q92973 898 aaKnown RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 ZNF668Q96K58 619 aaPredicted RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 MXRA8Q9BRK3 442 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 SEC63Q9UGP8 760 aaKnown RBP9.57□□□□□ -0.88
NEK9-206ENST00000555537 R4GN57 208 aa9.57□□□□□ -0.88
NEK9-206ENST00000555537 SPDYE3A6NKU9 549 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 ZBTB42B2RXF5 422 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 E7EWF7 191 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 HIP1O00291 1037 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 STK25O00506 426 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 BACH1O14867 736 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 NARSO43776 548 aaKnown RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 HBP1O60381 514 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 GPR32O75388 356 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 ATG7O95352 703 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 EOMESO95936 686 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 CCNE2O96020 404 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 AOC1P19801 751 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 ATP4AP20648 1035 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 CRYBB1P53674 252 aaPredicted RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 CLLU1OSQ5K130 101 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 DGLUCYQ7Z3D6 616 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 CCDC105Q8IYK2 499 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 ZNF654Q8IZM8 581 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 SIX5Q8N196 739 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 METTL13Q8N6R0 699 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 RIN2Q8WYP3 895 aaPredicted RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 SDF4Q9BRK5 362 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 ELAC1Q9H777 363 aaKnown RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 AGO4Q9HCK5 861 aaKnown RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
NEK9-206ENST00000555537 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
NEK9-206ENST00000555537 DNAH14Q0VDD8 3507 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 SPTBN4Q9H254 2564 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 CACNA1HO95180 2353 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 IGKV6D-21A0A0A0MT36 114 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 IGHDP01880 384 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 LMNAP02545 664 aaKnown RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 FGFR4P22455 802 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 BCAR1P56945 870 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 TDGQ13569 410 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 LONRF3Q496Y0 759 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 KIAA1841Q6NSI8 718 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 SWSAP1Q6NVH7 229 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 ABHD15Q6UXT9 468 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 CHD1LQ86WJ1 897 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 TMEM173Q86WV6 379 aaPredicted RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 ECHDC2Q86YB7 292 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 CCDC60Q8IWA6 550 aaPredicted RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 ABI1Q8IZP0 508 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 VPS52Q8N1B4 723 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 LRRC43Q8N309 656 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 NCOA7Q8NI08 942 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 HELQQ8TDG4 1101 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 SLC22A17Q8WUG5 538 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 KCNK12Q9HB15 430 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 LY9Q9HBG7 655 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 U3KPZ7 1027 aaPredicted RBP9.55□□□□□ -0.88
NEK9-206ENST00000555537 NFASCO94856 1347 aa9.55□□□□□ -0.88
NEK9-206ENST00000555537 CSDE1O75534 798 aaKnown RBP9.54□□□□□ -0.88
NEK9-206ENST00000555537 C22orf31O95567 290 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 CFHP08603 1231 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 MYBP10242 640 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 ZSCAN20P17040 1043 aaPredicted RBP9.54□□□□□ -0.88
NEK9-206ENST00000555537 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 KIF5BP33176 963 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 PPM1AP35813 382 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 CLCN3P51790 818 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 NLRP11P59045 1033 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms