RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 SQORQ9Y6N5 450 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 KDM3AQ9Y4C1 1321 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 TMEM150BA6NC51 233 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 CD52P31358 61 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 RFC5P40937 340 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 DEFB103AP81534 67 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 PTGDRQ13258 359 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 KIZQ2M2Z5 673 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 HAUS3Q68CZ6 603 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 ANO5Q75V66 913 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 BRAPQ7Z569 592 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 SNX21Q969T3 373 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
SRP54-206ENST00000555317 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
SRP54-206ENST00000555317 RPS6KA5O75582 802 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 SLC34A2O95436 690 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 CRYBB1P53674 252 aaPredicted RBP13.52□□□□□ -0.25
SRP54-206ENST00000555317 TARBP2Q15633 366 aaKnown RBP13.52□□□□□ -0.25
SRP54-206ENST00000555317 TCTN1Q2MV58 587 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 OSMRQ99650 979 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 SEMA6BQ9H3T3 888 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 ZNF576Q9H609 170 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
SRP54-206ENST00000555317 PTPRSQ13332 1948 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 GPR182O15218 404 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 GAS2O43903 313 aaKnown RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 MAFO75444 373 aaPredicted RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 SLITRK3O94933 977 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 STBD1O95210 358 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 GJB5O95377 273 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 CA3P07451 260 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■□□□□ 8.3
SRP54-206ENST00000555317 NPEPPSP55786 919 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 NLRP11P59045 1033 aaKnown RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRP54-206ENST00000555317 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 RAD9AQ99638 391 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 AGO3Q9H9G7 860 aaKnown RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 TUFT1Q9NNX1 390 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 SUCLA2Q9P2R7 463 aaPredicted RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 WRAP73Q9P2S5 460 aaPredicted RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
SRP54-206ENST00000555317 YBX2Q9Y2T7 364 aaKnown RBP13.51□□□□□ -0.25
SRP54-206ENST00000555317 UPP2O95045 317 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 LYPLA2O95372 231 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 BMP15O95972 392 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 MYOGP15173 224 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 CCT6AP40227 531 aaKnown RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 PRPHP41219 470 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 EMC2Q15006 297 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 TMCO2Q7Z6W1 182 aaPredicted RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 RHPN2Q8IUC4 686 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 LINC01465Q8N7H1 131 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 TCP11Q8WWU5 503 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 PSPC1Q8WXF1 523 aaKnown RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 MTRQ99707 1265 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 OSBPL7Q9BZF2 842 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 TTYH1Q9H313 450 aaPredicted RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 ANKEF1Q9NU02 776 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 CHD7Q9P2D1 2997 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
SRP54-206ENST00000555317 INSL6Q9Y581 213 aa13.5□□□□□ -0.25
SRP54-206ENST00000555317 IGKV6-21A0A0C4DH24 114 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 GPR32O75388 356 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 DGAT1O75907 488 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 SYT1P21579 422 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
SRP54-206ENST00000555317 EIF4BP23588 611 aaKnown RBP13.49□□□□□ -0.25
SRP54-206ENST00000555317 GPC3P51654 580 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 PDIA5Q14554 519 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 KRT79Q5XKE5 535 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 ZNF668Q96K58 619 aaPredicted RBP13.49□□□□□ -0.25
SRP54-206ENST00000555317 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms