RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SERPINB13Q9UIV8 391 aa6.93□□□□□ -1.3
PSEN1-211ENST00000554995 DNM3Q9UQ16 869 aa6.93□□□□□ -1.3
PSEN1-211ENST00000554995 FAM50BQ9Y247 325 aa6.93□□□□□ -1.3
PSEN1-211ENST00000554995 ANO9A1A5B4 782 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 ZC3H12DA2A288 527 aaKnown RBP6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PRAMEF22A3QJZ6 481 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 SRGAP3O43295 1099 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 APOL3O95236 402 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 HPXP02790 462 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PHKG2P15735 406 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 FAHP16930 419 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 AOAHP28039 575 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 SLC5A3P53794 718 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 ERVFC1P60507 584 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 SAFB2Q14151 953 aaKnown RBP eCLIP6.92□□□□□ -1.3
PSEN1-211ENST00000554995 MYBPC3Q14896 1274 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PRAMEF18Q5VWM3 479 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 TIGD7Q6NT04 549 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-211ENST00000554995 CHST15Q7LFX5 561 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PPM1NQ8N819 430 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 AUTS2Q8WXX7 1259 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PEX11GQ96HA9 241 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 MAML3Q96JK9 1138 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 WNT8AQ9H1J5 351 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 KCTD10Q9H3F6 313 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 TNFRSF12AQ9NP84 129 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
PSEN1-211ENST00000554995 BTBD7Q9P203 1132 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 PTPN22Q9Y2R2 807 aa6.92□□□□□ -1.3
PSEN1-211ENST00000554995 A6NNZ2 444 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 PAX4O43316 350 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 PRLP01236 227 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 PRNPP04156 253 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 MYBP10242 640 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-211ENST00000554995 FXR1P51114 621 aaKnown RBP eCLIP6.91□□□□□ -1.3
PSEN1-211ENST00000554995 GALK1P51570 392 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 USP14P54578 494 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 MUM1Q2TAK8 710 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 UAP1L1Q3KQV9 507 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 PRAMEF9Q5VWM5 478 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 INTS5Q6P9B9 1019 aaKnown RBP6.91□□□□□ -1.3
PSEN1-211ENST00000554995 UNQ6494/PRO21346Q6UXR6 183 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 TSHZ1Q6ZSZ6 1077 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 DIS3LQ8TF46 1054 aaKnown RBP6.91□□□□□ -1.3
PSEN1-211ENST00000554995 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 ACO2Q99798 780 aaKnown RBP6.91□□□□□ -1.3
PSEN1-211ENST00000554995 ARPC5LQ9BPX5 153 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 DPP7Q9UHL4 492 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 GPR160Q9UJ42 338 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 TMPRSS11EQ9UL52 423 aa6.91□□□□□ -1.3
PSEN1-211ENST00000554995 ST20-MTHFSA0A0A6YYL1 179 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 CYBBP04839 570 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 PNLIPP16233 465 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 FUT4P22083 530 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 MC4RP32245 332 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 ARL4AP40617 200 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 LGALS4P56470 323 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 ADCY2Q08462 1091 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 DBPQ10586 325 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 FZD5Q13467 585 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 TRIM25Q14258 630 aaKnown RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 LONRF3Q496Y0 759 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 MBNL2Q5VZF2 373 aaKnown RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 KIAA1841Q6NSI8 718 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 SLC23A3Q6PIS1 610 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 KANSL1Q7Z3B3 1105 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 LYSMD2Q8IV50 215 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 GRAMD1CQ8IYS0 662 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 COA7Q96BR5 231 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 IL17RAQ96F46 866 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-211ENST00000554995 MAP3K14Q99558 947 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 NUMBLQ9Y6R0 609 aa6.9□□□□□ -1.3
PSEN1-211ENST00000554995 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-211ENST00000554995 PMM2O15305 246 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 PDCP20941 246 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 PDE6BP35913 854 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 ROM1Q03395 351 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 C10orf62Q5T681 223 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-211ENST00000554995 SLFN12LQ6IEE8 588 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 USP45Q70EL2 814 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 LILRA2Q8N149 483 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 TSPEARQ8WU66 669 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 STRBPQ96SI9 672 aaKnown RBP6.89□□□□□ -1.31
PSEN1-211ENST00000554995 FOXB1Q99853 325 aa6.89□□□□□ -1.31
PSEN1-211ENST00000554995 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms