RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 VTNP04004 478 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 PSAPP07602 524 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 HMGB1P09429 215 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
RDH11-207ENST00000554731 NHLH1Q02575 133 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 PDE12Q6L8Q7 609 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 REXO1Q8N1G1 1221 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 COLGALT1Q8NBJ5 622 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 CCDC12Q8WUD4 166 aaPredicted RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 CRYGNQ8WXF5 182 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 CDCA3Q99618 268 aaPredicted RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 ELAC1Q9H777 363 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 TYW1Q9NV66 732 aaKnown RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 MAFBQ9Y5Q3 323 aaPredicted RBP14.15□□□□□ -0.14
RDH11-207ENST00000554731 EVPLQ92817 2033 aa14.15□□□□□ -0.14
RDH11-207ENST00000554731 LOC730098B7Z3J9 87 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 PER2O15055 1255 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 GPR32O75388 356 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 FGFR1P11362 822 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 LAG3P18627 525 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 ADD1P35611 737 aaKnown RBP14.14□□□□□ -0.15
RDH11-207ENST00000554731 MRE11P49959 708 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 FAM189BP81408 668 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 FAM167AQ96KS9 214 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 MAP7D2Q96T17 732 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 PHF7Q9BWX1 381 aaPredicted RBP14.14□□□□□ -0.15
RDH11-207ENST00000554731 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 PCDHA10Q9Y5I2 948 aa14.14□□□□□ -0.15
RDH11-207ENST00000554731 FNDC1Q4ZHG4 1894 aaPredicted RBP14.13□□□□□ -0.15
RDH11-207ENST00000554731 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 FSCN2O14926 492 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 MAGEB2O15479 319 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 HOXA2O43364 376 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 SRGAP2BP0DMP2 458 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 TMOD1P28289 359 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 GNA11P29992 359 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 CLCN3P51790 818 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 ERVFC1P60507 584 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 DSC3Q14574 896 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 CBX2Q14781 532 aaPredicted RBP14.13□□□□□ -0.15
RDH11-207ENST00000554731 DUSP6Q16828 381 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 PRR16Q569H4 304 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 BMP8AQ7Z5Y6 402 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 ZNF710Q8N1W2 664 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 TMEM117Q9H0C3 514 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 CWH43Q9H720 699 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 PUF60Q9UHX1 559 aaKnown RBP14.13□□□□□ -0.15
RDH11-207ENST00000554731 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 LZTS1Q9Y250 596 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
RDH11-207ENST00000554731 ZDBF2Q9HCK1 2354 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 C5orf42Q9H799 3197 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 TMEM221A6NGB7 291 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 M0R296 226 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 CDC45O75419 566 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 ZSCAN20P17040 1043 aaPredicted RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 ATF7P17544 494 aaPredicted RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 NLRP11P59045 1033 aaKnown RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 RBM10P98175 930 aaKnown RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 AKAP17AQ02040 695 aaKnown RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 APOBRQ0VD83 1088 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 EFCAB12Q6NXP0 572 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 VN1R2Q8NFZ6 395 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 BICD2Q8TD16 824 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 SUSD6Q92537 303 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 PBXIP1Q96AQ6 731 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 RPGRIP1Q96KN7 1286 aa14.12□□□□□ -0.15
RDH11-207ENST00000554731 MYH9P35579 1960 aaKnown RBP14.12□□□□□ -0.15
RDH11-207ENST00000554731 WDR64B1ANS9 1081 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 ADAMTS3O15072 1205 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 PRPF3O43395 683 aaKnown RBP14.11□□□□□ -0.15
RDH11-207ENST00000554731 EIF4BP23588 611 aaKnown RBP14.11□□□□□ -0.15
RDH11-207ENST00000554731 CIITAP33076 1130 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 PPM1AP35813 382 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 ZXDAP98168 799 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 PLCB3Q01970 1234 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 PKN1Q16512 942 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 PLPP4Q5VZY2 271 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 TMEM184AQ6ZMB5 413 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 Q6ZUG5 572 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 LRRC71Q8N4P6 559 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 ZNF558Q96NG5 402 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 CASD1Q96PB1 797 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 ADAMTS10Q9H324 1103 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
RDH11-207ENST00000554731 ENTPD7Q9NQZ7 604 aa14.11□□□□□ -0.15
RDH11-207ENST00000554731 NRBP2Q9NSY0 501 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms