RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CLCN3P51790 818 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 NEK4P51957 841 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 SETQ01105 290 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-215ENST00000554656 ADAM15Q13444 863 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 DSC3Q14574 896 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 UGCGQ16739 394 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 PRR16Q569H4 304 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF746Q6NUN9 644 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-215ENST00000554656 BLOC1S2Q6QNY1 142 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 TRMT1LQ7Z2T5 733 aaKnown RBP11.97□□□□□ -0.49
SHMT2-215ENST00000554656 FBXL16Q8N461 479 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 POF1BQ8WVV4 589 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 MSLNLQ96KJ4 702 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 RNF19AQ9NV58 838 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 ST3GAL5Q9UNP4 418 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 DCXO43602 365 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 NCK2O43639 380 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 FGFR1P11362 822 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 CRYBB1P53674 252 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-215ENST00000554656 FGD1P98174 961 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.49
SHMT2-215ENST00000554656 SMAD4Q13485 552 aaKnown RBP11.96□□□□□ -0.49
SHMT2-215ENST00000554656 NAALADL2Q58DX5 795 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-215ENST00000554656 GJA10Q969M2 543 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 C6orf50Q9HD87 102 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 RGS18Q9NS28 235 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 TBC1D22BQ9NU19 505 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 VPS54Q9P1Q0 977 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 GABBR1Q9UBS5 961 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 CD207Q9UJ71 328 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 LRFN2Q9ULH4 789 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 HCN4Q9Y3Q4 1203 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 ARIH1Q9Y4X5 557 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-215ENST00000554656 CYP46A1Q9Y6A2 500 aa11.96□□□□□ -0.49
SHMT2-215ENST00000554656 WDFY4Q6ZS81 3184 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 DENND3A2RUS2 1198 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PRR33A8MZF0 331 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 MSH4O15457 936 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 EYA4O95677 639 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PSAPP07602 524 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 IFNAR1P17181 557 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PDIA3P30101 505 aaKnown RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 NRIP1P48552 1158 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 EVCP57679 992 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 CCT2P78371 535 aaKnown RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 FAM189BP81408 668 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 TOB2Q14106 344 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 CKAP2LQ8IYA6 745 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 SMAP1Q8IYB5 467 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 EFHBQ8N7U6 833 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 COLGALT1Q8NBJ5 622 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 VN1R2Q8NFZ6 395 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 CCDC12Q8WUD4 166 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 SLC26A6Q9BXS9 759 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 RNF26Q9BY78 433 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 CWH43Q9H720 699 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 C1orf112Q9NSG2 853 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 BARX2Q9UMQ3 279 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-215ENST00000554656 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PCDHB7Q9Y5E2 793 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PCDHA10Q9Y5I2 948 aa11.95□□□□□ -0.5
SHMT2-215ENST00000554656 PIEZO1Q92508 2521 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
SHMT2-215ENST00000554656 ALADP13716 330 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 GNA11P29992 359 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 NDUFV1P49821 464 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 PRKCEQ02156 737 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 ANKRD1Q15327 319 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 NPY5RQ15761 445 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
SHMT2-215ENST00000554656 METTL13Q8N6R0 699 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 UNC45AQ9H3U1 944 aa11.94□□□□□ -0.5
SHMT2-215ENST00000554656 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
SHMT2-215ENST00000554656 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-215ENST00000554656 ARID2Q68CP9 1835 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 WDR64B1ANS9 1081 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 M0R2N6 131 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 FSCN2O14926 492 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 GPR182O15218 404 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 FGF18O76093 207 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 STBD1O95210 358 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 OATP04181 439 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms