RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-214ENST00000554604 SYCE3A1L190 88 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 DLL1O00548 723 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 EDIL3O43854 480 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 ATP4AP20648 1035 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 CYP3A7P24462 503 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 SFNP31947 248 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 JAK3P52333 1124 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-214ENST00000554604 LETM2Q2VYF4 491 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 METTL13Q8N6R0 699 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 GJA10Q969M2 543 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 C8orf76Q96K31 380 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 TGS1Q96RS0 853 aaKnown RBP13.95□□□□□ -0.18
SHMT2-214ENST00000554604 CELF4Q9BZC1 486 aaKnown RBP13.95□□□□□ -0.18
SHMT2-214ENST00000554604 BRMS1Q9HCU9 246 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 GINS2Q9Y248 185 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 REV3LO60673 3130 aa13.95□□□□□ -0.18
SHMT2-214ENST00000554604 LINC01553A4QN01 128 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 EPOPA6NHQ4 379 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 MARCH6O60337 910 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 CD52P31358 61 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 PAK2Q13177 524 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 TRIM29Q14134 588 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 SPRED2Q7Z698 418 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 NEK8Q86SG6 692 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 FBXO18Q8NFZ0 1043 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-214ENST00000554604 UNC45AQ9H3U1 944 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 AGO3Q9H9G7 860 aaKnown RBP13.94□□□□□ -0.18
SHMT2-214ENST00000554604 NRBP2Q9NSY0 501 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 SQORQ9Y6N5 450 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 MYO7AQ13402 2215 aa13.94□□□□□ -0.18
SHMT2-214ENST00000554604 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 MAGEB2O15479 319 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 PSMD10O75832 226 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 OATP04181 439 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 GCFC2P16383 781 aaKnown RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 KRT2P35908 639 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 FOSBP53539 338 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 ERVK-21P61565 698 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 HTRA4P83105 476 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 PRKCEQ02156 737 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 BRAPQ7Z569 592 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 OXER1Q8TDS5 423 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 MBOAT7Q96N66 472 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 NAP1L4Q99733 375 aaKnown RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 FTHL17Q9BXU8 183 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 PANK2Q9BZ23 570 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
SHMT2-214ENST00000554604 RCOR1Q9UKL0 485 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 PADI3Q9ULW8 664 aa13.93□□□□□ -0.18
SHMT2-214ENST00000554604 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 ENPP3O14638 875 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 SLC37A4O43826 429 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 ZNF862O60290 1169 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 CCNT1O60563 726 aaKnown RBP13.92□□□□□ -0.18
SHMT2-214ENST00000554604 C22orf31O95567 290 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 TMOD1P28289 359 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 NFX1Q12986 1120 aaKnown RBP13.92□□□□□ -0.18
SHMT2-214ENST00000554604 GRB10Q13322 594 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 PPP4R3AQ6IN85 833 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 ETNPPLQ8TBG4 499 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
SHMT2-214ENST00000554604 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 RPS6KA5O75582 802 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 POU3F3P20264 500 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-214ENST00000554604 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 NR5A1Q13285 461 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 UGCGQ16739 394 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 KRT40Q6A162 431 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 EFCAB12Q6NXP0 572 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-214ENST00000554604 FAM20AQ96MK3 541 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 SAMD11Q96NU1 681 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
SHMT2-214ENST00000554604 PRDM6Q9NQX0 595 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms