RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 TMC3Q7Z5M5 1100 aa12.17□□□□□ -0.46
NUMB-212ENST00000554546 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
NUMB-212ENST00000554546 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
NUMB-212ENST00000554546 MYH10P35580 1976 aa12.17□□□□□ -0.46
NUMB-212ENST00000554546 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 C11orf74Q86VG3 221 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 ECHDC2Q86YB7 292 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 MB21D1Q8N884 522 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.16□□□□□ -0.466e-11■■■■■ 70.8
NUMB-212ENST00000554546 MAP3K14Q99558 947 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 NUP85Q9BW27 656 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 KIAA1683Q9H0B3 1180 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 SALL4Q9UJQ4 1053 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 PACSIN2Q9UNF0 486 aaPredicted RBP12.16□□□□□ -0.46
NUMB-212ENST00000554546 STX8Q9UNK0 236 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
NUMB-212ENST00000554546 VWDEQ8N2E2 1590 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 BCL9O00512 1426 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 MATN2O00339 956 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 FTCDO95954 541 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 GRIA2P42262 883 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 SLCO1A2P46721 670 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 AP1B1Q10567 949 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 MSLNQ13421 630 aaPredicted RBP12.16□□□□□ -0.46
NUMB-212ENST00000554546 GPR162Q16538 588 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 KLHDC7AQ5VTJ3 777 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 C3orf62Q6ZUJ4 267 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 DGCR14Q96DF8 476 aaKnown RBP12.16□□□□□ -0.46
NUMB-212ENST00000554546 CGREF1Q99674 301 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 CCDC134Q9H6E4 229 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 RASA4BC9J798 803 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 RASA4O43374 803 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 ECE2O60344 883 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 RASSF2P50749 326 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 MEA1Q16626 185 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 DSTYKQ6XUX3 929 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 USP49Q70CQ1 688 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 STAMQ92783 540 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
NUMB-212ENST00000554546 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
NUMB-212ENST00000554546 COL15A1P39059 1388 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 PGM3O95394 542 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 CNGA2Q16280 664 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 WASHC4Q2M389 1173 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 MAK16Q9BXY0 300 aaKnown RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 SMIM31A0A1B0GVY4 71 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 SLC26A4O43511 780 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 TBC1D12O60347 775 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 CYP2C9P11712 490 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 IZUMO2Q6UXV1 221 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 RBM44Q6ZP01 1051 aaKnown RBP12.15□□□□□ -0.46
NUMB-212ENST00000554546 ZBED8Q8IZ13 594 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 RIN3Q8TB24 985 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 USP6NLQ92738 828 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
NUMB-212ENST00000554546 CBX6O95503 412 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 MARK3P27448 753 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 GTF2H1P32780 548 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 EIF3BP55884 814 aaKnown RBP12.15□□□□□ -0.47
NUMB-212ENST00000554546 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 C1orf228Q6PIY5 440 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.47
NUMB-212ENST00000554546 TTLL11Q8NHH1 800 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 STMN2Q93045 179 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 ERLEC1Q96DZ1 483 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 TTLL3Q9Y4R7 772 aa12.15□□□□□ -0.47
NUMB-212ENST00000554546 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
NUMB-212ENST00000554546 ATP5HO75947 161 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 MZF1P28698 734 aaPredicted RBP12.14□□□□□ -0.47
NUMB-212ENST00000554546 IL13P35225 146 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 EIF2B2P49770 351 aaKnown RBP12.14□□□□□ -0.47
NUMB-212ENST00000554546 KLK7P49862 253 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
NUMB-212ENST00000554546 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 GIT1Q9Y2X7 761 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 CDC42BPBQ9Y5S2 1711 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
NUMB-212ENST00000554546 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms