RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 MMP19Q99542 508 aa17.45■□□□□ 0.38
TUBB3-206ENST00000554444 TYW1Q9NV66 732 aaKnown RBP17.45■□□□□ 0.38
TUBB3-206ENST00000554444 CCL15-CCL14A0A0B4J2E2 113 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 A0A1W2PQJ5 194 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 DKC1O60832 514 aaKnown RBP eCLIP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 PPP1R37O75864 691 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 MAPTP10636 758 aaKnown RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 KCTD2Q14681 263 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 CCL15Q16663 113 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 TSR1Q2NL82 804 aaKnown RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 ZC2HC1CQ53FD0 456 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 FKBP15Q5T1M5 1219 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 CYFIP1Q7L576 1253 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 GPRC5AQ8NFJ5 357 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 PORCNQ9H237 461 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 PES1O00541 588 aaKnown RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 CETN3O15182 167 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 ZBTB48P10074 688 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 NPEPPSP55786 919 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 MEA1Q16626 185 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 NFIL3Q16649 462 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 CCDC60Q8IWA6 550 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 TRIM59Q8IWR1 403 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 SH2D3AQ9BRG2 576 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 LARSQ9P2J5 1176 aaKnown RBP17.44■□□□□ 0.38
TUBB3-206ENST00000554444 PCDHB13Q9Y5F0 798 aa17.44■□□□□ 0.38
TUBB3-206ENST00000554444 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 IGKV6D-21A0A0A0MT36 114 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 CALUO43852 315 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-206ENST00000554444 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 NR2F2P24468 414 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 WDR24Q96S15 920 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 NMRK2Q9NPI5 230 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 PDLIM7Q9NR12 457 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 MYO1AQ9UBC5 1043 aa17.43■□□□□ 0.38
TUBB3-206ENST00000554444 UBE4BO95155 1302 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 LOC102724159A0A0B4J2E5 919 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 KIF5CO60282 957 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 URI1O94763 535 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 PLS3P13797 630 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 UBA1P22314 1058 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 ZBED6P86452 979 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 PWP2Q15269 919 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 STXBP4Q6ZWJ1 553 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 PTPN18Q99952 460 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 TRIM21P19474 475 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 GCLCP48506 637 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 CDK17Q00537 523 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 ZNF526Q8TF50 670 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 ST6GALNAC4Q9H4F1 302 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 MORF4L1Q9UBU8 362 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 SIK3Q9Y2K2 1263 aa17.42■□□□□ 0.38
TUBB3-206ENST00000554444 EPN1Q9Y6I3 576 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-206ENST00000554444 LOXHD1Q8IVV2 1947 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 FARP2O94887 1054 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-206ENST00000554444 NDUFA10O95299 355 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 ATP4AP20648 1035 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 RPL13P26373 211 aaKnown RBP17.41■□□□□ 0.38
TUBB3-206ENST00000554444 CCNA1P78396 465 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 SP4Q02446 784 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 TUBB2AQ13885 445 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 NEDD9Q14511 834 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 NAA30Q147X3 362 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-206ENST00000554444 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 TRMT1LQ7Z2T5 733 aaKnown RBP17.41■□□□□ 0.38
TUBB3-206ENST00000554444 FRMD5Q7Z6J6 570 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 TUBB2BQ9BVA1 445 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 CCDC94Q9BW85 323 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-206ENST00000554444 MRFAP1Q9Y605 127 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 IGSF9BQ9UPX0 1349 aa17.41■□□□□ 0.38
TUBB3-206ENST00000554444 GSTTP1A0A1W2PQM5 241 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 NR3C1P04150 777 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 KLK7P49862 253 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 ANKRD13CQ8N6S4 541 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-206ENST00000554444 TMEM174Q8WUU8 243 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
TUBB3-206ENST00000554444 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
TUBB3-206ENST00000554444 NTPCRQ9BSD7 190 aaKnown RBP17.4■□□□□ 0.38
TUBB3-206ENST00000554444 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms