RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CXCR5P32302 372 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MATR3P43243 847 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MASP1P48740 699 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 JAG1P78504 1218 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 KCNJ12Q14500 433 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IL17AQ16552 155 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 RILPL1Q5EBL4 403 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ARSHQ5FYA8 562 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TCP11X2Q5H9J9 407 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CCNI2Q6ZMN8 369 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 EP400NLQ6ZTU2 488 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SPATC1Q76KD6 591 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 REC114Q7Z4M0 266 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SGMS1Q86VZ5 419 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ELOA2Q8IYF1 753 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IFNL3Q8IZI9 196 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IFNL2Q8IZJ0 200 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 REXO1Q8N1G1 1221 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SH2D3CQ8N5H7 860 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MSL3Q8N5Y2 521 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 FAM76AQ8TAV0 307 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CAGE1Q8TC20 777 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 BCAS4Q8TDM0 211 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NELFBQ8WX92 580 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 JAKMIP2Q96AA8 810 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ARL8AQ96BM9 186 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TMEM87BQ96K49 555 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NSUN5Q96P11 429 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 STRBPQ96SI9 672 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PLIN2Q99541 437 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SLC30A3Q99726 388 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GBP3Q9H0R5 595 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 FOXP1Q9H334 677 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 DEF6Q9H4E7 631 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GREM2Q9H772 168 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 YY1AP1Q9H869 796 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ZFYVE1Q9HBF4 777 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 BRMS1Q9HCU9 246 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 JADE2Q9NQC1 790 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 AGPAT5Q9NUQ2 364 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NDFIP2Q9NV92 336 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GEMIN8Q9NWZ8 242 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6AQ9NYA3 693 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SAR1BQ9Y6B6 198 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GJA3Q9Y6H8 435 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GRIN2DO15399 1336 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SPATA31A3Q5VYP0 1347 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 WDR19Q8NEZ3 1342 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGB1Q14789 3259 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 ADAMTS7Q9UKP4 1686 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 SPEF2Q9C093 1822 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 CHD4Q14839 1912 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 A0A087WUV0 522 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 DCDC2BA2VCK2 349 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6BA6NDN3 693 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM75PA6NK02 468 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RASSF10A6NK89 507 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 FIGNL2A6NMB9 653 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 FER1L4A9Z1Z3 1794 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PSMD14O00487 310 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 SHOX2O60902 331 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 SLIT3O75094 1523 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM37O94972 964 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 MAP3K6O95382 1288 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PLEKHA8P1O95397 391 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 CPP00450 1065 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PLEKP08567 350 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PARP1P09874 1014 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 H2AFB1P0C5Y9 115 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 H2AFB2P0C5Z0 115 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 GLI3P10071 1580 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 SELPP16109 830 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 LIFRP42702 1097 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PRCPP42785 496 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 MNAT1P51948 309 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 GNGT1P63211 74 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 ATP11AP98196 1134 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PTPN11Q06124 597 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 IFIT5Q13325 482 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PDCLQ13371 301 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TUBB2AQ13885 445 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 WTAPQ15007 396 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TTF1Q15361 905 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 PKN1Q16512 942 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RIC1Q4ADV7 1423 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TTMPQ5BVD1 217 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 DALRD3Q5D0E6 543 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RPS26P11Q5JNZ5 115 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 KCTD16Q68DU8 428 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 MRM1Q6IN84 353 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 LDHAL6AQ6ZMR3 332 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RUFY4Q6ZNE9 571 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 MMS22LQ6ZRQ5 1243 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 KRT26Q7Z3Y9 468 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RAB44Q7Z6P3 723 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 IRF2BP1Q8IU81 584 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM22Q8IYM9 498 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 THEMISQ8N1K5 641 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 MAGEB6Q8N7X4 407 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms