RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 UGCGQ16739 394 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 MIER3Q7Z3K6 550 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 CCDC83Q8IWF9 413 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 DIS3L2Q8IYB7 885 aaKnown RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 SLFN12Q8IYM2 578 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 LINC01465Q8N7H1 131 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 MAFAQ8NHW3 353 aaPredicted RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 GJA10Q969M2 543 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 TOP1MTQ969P6 601 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 GAS2L1Q99501 681 aaPredicted RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 RAD9AQ99638 391 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 CELF4Q9BZC1 486 aaKnown RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 FAM49AQ9H0Q0 323 aaPredicted RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 PRDM12Q9H4Q4 367 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 NRBP2Q9NSY0 501 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 INSL6Q9Y581 213 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 TRPV2Q9Y5S1 764 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 POU3F3P20264 500 aaPredicted RBP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 TAP1Q03518 808 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 SPIRE1Q08AE8 756 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 TARBP2Q15633 366 aaKnown RBP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 KIAA0319LQ8IZA0 1049 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 MYOCDQ8IZQ8 938 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 HAS1Q92839 578 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 CEP89Q96ST8 783 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 ZBED2Q9BTP6 218 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 FTHL17Q9BXU8 183 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 NIFKQ9BYG3 293 aaKnown RBP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 AGO3Q9H9G7 860 aaKnown RBP8.47□□□□□ -1.05
LINC00640-201ENST00000554409 TSHZ2Q9NRE2 1034 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 VAV3Q9UKW4 847 aa8.47□□□□□ -1.05
LINC00640-201ENST00000554409 TTC3P53804 2025 aa8.46□□□□□ -1.05
LINC00640-201ENST00000554409 LCHNA4D1U4 455 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 RBAK-RBAKDNI3L0D1 243 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 EML1O00423 815 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 ENPP3O14638 875 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 DKC1O60832 514 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00640-201ENST00000554409 STBD1O95210 358 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 BAG4O95429 457 aaKnown RBP8.46□□□□□ -1.06
LINC00640-201ENST00000554409 CD52P31358 61 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 ERVK-21P61565 698 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 PSMC5P62195 406 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM62Q0P6H9 643 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 PAK2Q13177 524 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 SAFBQ15424 915 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00640-201ENST00000554409 XKR3Q5GH77 459 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 ODR4Q5SWX8 454 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 C8orf76Q96K31 380 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 TBC1D32Q96NH3 1257 aa8.46□□□□□ -1.06
LINC00640-201ENST00000554409 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.06
LINC00640-201ENST00000554409 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
LINC00640-201ENST00000554409 KIAA1671Q9BY89 1806 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 IGKV6-21A0A0C4DH24 114 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 LINC01553A4QN01 128 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 EPOPA6NHQ4 379 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 NEMFO60524 1076 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 GPR32O75388 356 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 P4HBP07237 508 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 TMOD1P28289 359 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 QARSP47897 775 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 CLCN3P51790 818 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 FOSBP53539 338 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 CRYBB1P53674 252 aaPredicted RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 ORC2Q13416 577 aaPredicted RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 EPHA7Q15375 998 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 EFCAB12Q6NXP0 572 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 TRMT1LQ7Z2T5 733 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 CRIPAKQ8N1N5 446 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 FBXO18Q8NFZ0 1043 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM40Q8WWA1 233 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 LINC01599Q8WXQ3 324 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 SAMD11Q96NU1 681 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 TGS1Q96RS0 853 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 MAP7D2Q96T17 732 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 CDHR5Q9HBB8 845 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 ERVK-5Q9HDB9 667 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 PADI3Q9ULW8 664 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 PPME1Q9Y570 386 aa8.45□□□□□ -1.06
LINC00640-201ENST00000554409 LAMA2P24043 3122 aaKnown RBP8.45□□□□□ -1.06
LINC00640-201ENST00000554409 WNT7AO00755 349 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 GPR182O15218 404 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 MARCH6O60337 910 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 RPS6KA5O75582 802 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CD2BP2O95400 341 aaKnown RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 VTNP04004 478 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 MCM2P49736 904 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms