RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 RPGRIP1Q96KN7 1286 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 ANO3Q9BYT9 981 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 HBP1O60381 514 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
TUBB3-204ENST00000554116 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
TUBB3-204ENST00000554116 KIZQ2M2Z5 673 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 PPP1R16BQ96T49 567 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
TUBB3-204ENST00000554116 M0QZ92 97 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 DDX39AO00148 427 aaKnown RBP13.15□□□□□ -0.3
TUBB3-204ENST00000554116 VTNP04004 478 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 CDC27P30260 824 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 PBX3P40426 434 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 SLC26A2P50443 739 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 NAPAP54920 295 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 OSMRQ99650 979 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 FAM86C1Q9NVL1 165 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 PCDHB12Q9Y5F1 795 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 MAFBQ9Y5Q3 323 aaPredicted RBP13.15□□□□□ -0.3
TUBB3-204ENST00000554116 V9GY48 417 aaPredicted RBP13.15□□□□□ -0.3
TUBB3-204ENST00000554116 COL1A2P08123 1366 aa13.15□□□□□ -0.3
TUBB3-204ENST00000554116 SMCO2A6NFE2 343 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
TUBB3-204ENST00000554116 CYP3A4P08684 503 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
TUBB3-204ENST00000554116 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 ZNF484Q5JVG2 852 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 MICAL1Q8TDZ2 1067 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 ADAMTS10Q9H324 1103 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
TUBB3-204ENST00000554116 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
TUBB3-204ENST00000554116 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 ZNF862O60290 1169 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-204ENST00000554116 AVPR2P30518 371 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 ADCY7P51828 1080 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 NUBP1P53384 320 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
TUBB3-204ENST00000554116 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-204ENST00000554116 TNPO1Q92973 898 aaKnown RBP13.13□□□□□ -0.31
TUBB3-204ENST00000554116 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-204ENST00000554116 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
TUBB3-204ENST00000554116 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 IPO5O00410 1097 aaKnown RBP13.12□□□□□ -0.31
TUBB3-204ENST00000554116 BACH1O14867 736 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 GPR182O15218 404 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 TECP42680 631 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 CLCN3P51790 818 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
TUBB3-204ENST00000554116 JAKMIP3Q5VZ66 844 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-204ENST00000554116 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
TUBB3-204ENST00000554116 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 LENG9Q96B70 501 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
TUBB3-204ENST00000554116 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
TUBB3-204ENST00000554116 LAG3P18627 525 aa13.11□□□□□ -0.31
TUBB3-204ENST00000554116 SP100P23497 879 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-204ENST00000554116 ADD1P35611 737 aaKnown RBP13.11□□□□□ -0.31
TUBB3-204ENST00000554116 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
TUBB3-204ENST00000554116 RTN1Q16799 776 aa13.11□□□□□ -0.31
TUBB3-204ENST00000554116 FAM160B1Q5W0V3 765 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms