RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 TCP11L1Q9NUJ3 509 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 RBM28Q9NW13 759 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SUCLA2Q9P2R7 463 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 DBR1Q9UK59 544 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PADI3Q9ULW8 664 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MAPK8IP1Q9UQF2 711 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PCDHB12Q9Y5F1 795 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PCDHA10Q9Y5I2 948 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TIMM13Q9Y5L4 95 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ARFGEF2Q9Y6D5 1785 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 FLNBO75369 2602 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 BAZ2AQ9UIF9 1905 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MYO10Q9HD67 2058 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TIAM2Q8IVF5 1701 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 RGPD3A6NKT7 1758 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 RGPD4Q7Z3J3 1758 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PP2D1A8MPX8 630 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TADA2AO75478 443 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ZMYND10O75800 440 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CABYRO75952 493 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 DEXIO95424 95 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 IQCF3P0C7M6 154 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ITGB5P18084 799 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MCCD1P59942 119 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MRPS9P82933 396 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PRKCEQ02156 737 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 GRM4Q14833 912 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ENOX2Q16206 610 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TMEM240Q5SV17 173 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CELF3Q5SZQ8 465 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 KRT79Q5XKE5 535 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TYW1BQ6NUM6 668 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 GLB1LQ6UWU2 654 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 METTL7BQ6UX53 244 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 FAM43BQ6ZT52 329 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CACUL1Q86Y37 369 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CCDC60Q8IWA6 550 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 USP38Q8NB14 1042 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CLEC4DQ8WXI8 215 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 IL17RAQ96F46 866 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 DYDC2Q96IM9 177 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 IFT74Q96LB3 600 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PGLYRP2Q96PD5 576 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ADPGKQ9BRR6 497 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 BHMT2Q9H2M3 363 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 IL23AQ9NPF7 189 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 FAM86C1Q9NVL1 165 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MTMR10Q9NXD2 777 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 LRWD1Q9UFC0 647 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TPCN1Q9ULQ1 816 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 BARX2Q9UMQ3 279 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ST3GAL5Q9UNP4 418 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 KIAA1024Q9UPX6 916 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 SLC45A1Q9Y2W3 748 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 SCN7AQ01118 1682 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 NUMA1Q14980 2115 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 COL6A6A6NMZ7 2263 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 VPS13AQ96RL7 3174 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 DOCK8Q8NF50 2099 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PDS5AQ29RF7 1337 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 SNED1Q8TER0 1413 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 WDR64B1ANS9 1081 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 NEMFO60524 1076 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PHACTR2O75167 634 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 B3GAT3O94766 335 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CXCL14O95715 111 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 FOSP01100 380 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CD72P21854 359 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 GJB2P29033 226 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 WEE1P30291 646 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PEX3P56589 373 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 SCRN1Q12765 414 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CBX2Q14781 532 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 RAB30Q15771 203 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 ME3Q16798 604 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 HSP90AA4PQ58FG1 418 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TCERG1LQ5VWI1 586 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 HEATR6Q6AI08 1181 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 KLHL10Q6JEL2 608 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TAPT1Q6NXT6 567 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 RUFY4Q6ZNE9 571 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 NEK8Q86SG6 692 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 HERC6Q8IVU3 1022 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MB21D2Q8IYB1 491 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MYCT1Q8N699 235 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 DNERQ8NFT8 737 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 PSPC1Q8WXF1 523 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 WASF1Q92558 559 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 MKL1Q969V6 931 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CHAMP1Q96JM3 812 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 GAD1Q99259 594 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 GCOM2Q9BZD3 368 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 OSBPL7Q9BZF2 842 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 NACA2Q9H009 215 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 RANBP17Q9H2T7 1088 aaKnown RBP2.79□□□□□ -1.96
PRPF39-205ENST00000554081 THEGQ9P2T0 379 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 USP54Q70EL1 1684 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CEP295Q9C0D2 2601 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms