RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 JAKMIP3Q5VZ66 844 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 TYW1BQ6NUM6 668 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 CCDC60Q8IWA6 550 aaPredicted RBP10.02□□□□□ -0.81
TDP1-208ENST00000553989 METTL13Q8N6R0 699 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 EFHBQ8N7U6 833 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 FBXL18Q96ME1 805 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 OSMRQ99650 979 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 ADAM2Q99965 735 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 TMX1Q9H3N1 280 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 SLC24A3Q9HC58 644 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 TLR9Q9NR96 1032 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 C1orf112Q9NSG2 853 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 NOC2LQ9Y3T9 749 aaKnown RBP10.02□□□□□ -0.81
TDP1-208ENST00000553989 PCDHGC5Q9Y5F6 944 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 KDM3AQ9Y4C1 1321 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 COL1A2P08123 1366 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 KIAA1671Q9BY89 1806 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 MEIS1O00470 390 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 PER2O15055 1255 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 MGEA5O60502 916 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 CCNE2O96020 404 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 SREBF1P36956 1147 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 MRE11P49959 708 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 NHLH1Q02575 133 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 KIZQ2M2Z5 673 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 HERC4Q5GLZ8 1057 aaPredicted RBP10.01□□□□□ -0.81
TDP1-208ENST00000553989 ZNF484Q5JVG2 852 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 SWSAP1Q6NVH7 229 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 SLC24A5Q71RS6 500 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 DHX32Q7L7V1 743 aaKnown RBP10.01□□□□□ -0.81
TDP1-208ENST00000553989 TEX2Q8IWB9 1127 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 SUGP1Q8IWZ8 645 aaKnown RBP10.01□□□□□ -0.81
TDP1-208ENST00000553989 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 MS4A3Q96HJ5 214 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 SCLT1Q96NL6 688 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 ATP6V0A4Q9HBG4 840 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 ERVK-5Q9HDB9 667 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 BARHL2Q9NY43 387 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 CLEC1BQ9P126 229 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 ST3GAL5Q9UNP4 418 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 USP15Q9Y4E8 981 aaPredicted RBP10.01□□□□□ -0.81
TDP1-208ENST00000553989 SAMM50Q9Y512 469 aa10.01□□□□□ -0.81
TDP1-208ENST00000553989 FSD2A1L4K1 749 aa10□□□□□ -0.81
TDP1-208ENST00000553989 FAM86B1E9PN63 330 aa10□□□□□ -0.81
TDP1-208ENST00000553989 IPO5O00410 1097 aaKnown RBP10□□□□□ -0.81
TDP1-208ENST00000553989 ZMYND10O75800 440 aa10□□□□□ -0.81
TDP1-208ENST00000553989 FGF18O76093 207 aa10□□□□□ -0.81
TDP1-208ENST00000553989 ATG7O95352 703 aa10□□□□□ -0.81
TDP1-208ENST00000553989 EYA4O95677 639 aa10□□□□□ -0.81
TDP1-208ENST00000553989 VTNP04004 478 aa10□□□□□ -0.81
TDP1-208ENST00000553989 FAM86B2P0C5J1 330 aa10□□□□□ -0.81
TDP1-208ENST00000553989 FGFR1P11362 822 aa10□□□□□ -0.81
TDP1-208ENST00000553989 LAG3P18627 525 aa10□□□□□ -0.81
TDP1-208ENST00000553989 CA8P35219 290 aa10□□□□□ -0.81
TDP1-208ENST00000553989 METAP2P50579 478 aaKnown RBP eCLIP10□□□□□ -0.81
TDP1-208ENST00000553989 SETQ01105 290 aaPredicted RBP10□□□□□ -0.81
TDP1-208ENST00000553989 UBE3AQ05086 875 aa10□□□□□ -0.81
TDP1-208ENST00000553989 COASYQ13057 564 aa10□□□□□ -0.81
TDP1-208ENST00000553989 FAM102BQ5T8I3 360 aa10□□□□□ -0.81
TDP1-208ENST00000553989 PLPP4Q5VZY2 271 aa10□□□□□ -0.81
TDP1-208ENST00000553989 ABHD15Q6UXT9 468 aa10□□□□□ -0.81
TDP1-208ENST00000553989 NIPA1Q7RTP0 329 aa10□□□□□ -0.81
TDP1-208ENST00000553989 ZBTB33Q86T24 672 aa10□□□□□ -0.81
TDP1-208ENST00000553989 HSCBQ8IWL3 235 aa10□□□□□ -0.81
TDP1-208ENST00000553989 KIAA0319LQ8IZA0 1049 aa10□□□□□ -0.81
TDP1-208ENST00000553989 ABI1Q8IZP0 508 aa10□□□□□ -0.81
TDP1-208ENST00000553989 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
TDP1-208ENST00000553989 COLGALT1Q8NBJ5 622 aa10□□□□□ -0.81
TDP1-208ENST00000553989 RNF169Q8NCN4 708 aa10□□□□□ -0.81
TDP1-208ENST00000553989 CCDC12Q8WUD4 166 aaPredicted RBP10□□□□□ -0.81
TDP1-208ENST00000553989 TMEM40Q8WWA1 233 aa10□□□□□ -0.81
TDP1-208ENST00000553989 EDAQ92838 391 aa10□□□□□ -0.81
TDP1-208ENST00000553989 PBXIP1Q96AQ6 731 aa10□□□□□ -0.81
TDP1-208ENST00000553989 MSLNLQ96KJ4 702 aa10□□□□□ -0.81
TDP1-208ENST00000553989 MAP7D2Q96T17 732 aa10□□□□□ -0.81
TDP1-208ENST00000553989 KCNH6Q9H252 994 aa10□□□□□ -0.81
TDP1-208ENST00000553989 CDHR5Q9HBB8 845 aa10□□□□□ -0.81
TDP1-208ENST00000553989 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
TDP1-208ENST00000553989 RGS18Q9NS28 235 aa10□□□□□ -0.81
TDP1-208ENST00000553989 TYW1Q9NV66 732 aaKnown RBP10□□□□□ -0.81
TDP1-208ENST00000553989 HCSTQ9UBK5 93 aa10□□□□□ -0.81
TDP1-208ENST00000553989 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
TDP1-208ENST00000553989 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
TDP1-208ENST00000553989 AKT3Q9Y243 479 aa10□□□□□ -0.81
TDP1-208ENST00000553989 IGKV6D-21A0A0A0MT36 114 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 CCDC196A0A1B0GTZ2 297 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 TMEM221A6NGB7 291 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 M0R296 226 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 HOXA2O43364 376 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 C22orf31O95567 290 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 GLP2RO95838 553 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 PSAPP07602 524 aa9.99□□□□□ -0.81
TDP1-208ENST00000553989 ZSCAN20P17040 1043 aaPredicted RBP9.99□□□□□ -0.81
TDP1-208ENST00000553989 TMOD1P28289 359 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms