RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 KIAA0753Q2KHM9 967 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 LHX8Q68G74 356 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 DHX33Q9H6R0 707 aaKnown RBP16.09■□□□□ 0.17
SHMT2-210ENST00000553950 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 LARSQ9P2J5 1176 aaKnown RBP16.09■□□□□ 0.17
SHMT2-210ENST00000553950 SIP14410 1827 aa16.08■□□□□ 0.17
SHMT2-210ENST00000553950 FRMD3A2A2Y4 597 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 MYADML2A6NDP7 307 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 KIF20AO95235 890 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 CAVIN2O95810 425 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 ASGR1P07306 291 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 IDEP14735 1019 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 PTGS1P23219 599 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 DNM2P50570 870 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 RTP1P59025 263 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 PSMD2Q13200 908 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 PPP2R5AQ15172 486 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 STXBP4Q6ZWJ1 553 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 DYMQ7RTS9 669 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 REEP2Q9BRK0 252 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 BLZF1Q9H2G9 400 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.16
SHMT2-210ENST00000553950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-210ENST00000553950 SYCE3A1L190 88 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 H0YCG3 227 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 RHOBTB3O94955 611 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 TMOD1P28289 359 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
SHMT2-210ENST00000553950 NPEPPSP55786 919 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 PTPN11Q06124 597 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-210ENST00000553950 STIM1Q13586 685 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 ALCAMQ13740 583 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 GRIK4Q16099 956 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 KCNA10Q16322 511 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 CCSAPQ6IQ19 270 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-210ENST00000553950 NFRKBQ6P4R8 1299 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 STAMQ92783 540 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 KAT2BQ92831 832 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 DNAJC19Q96DA6 116 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 OLFML3Q9NRN5 406 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 PANK4Q9NVE7 773 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
SHMT2-210ENST00000553950 UBE4BO95155 1302 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 HIP1RO75146 1068 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 MAFO75444 373 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 GJB1P08034 283 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 MAPTP10636 758 aaKnown RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 INSRRP14616 1297 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ZNF131P52739 623 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ACLYP53396 1101 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ZNF445P59923 1031 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 COASYQ13057 564 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 DMP1Q13316 513 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 GIT2Q14161 759 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ARSHQ5FYA8 562 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 CT47A1Q5JQC4 288 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 FAM26FQ5R3K3 315 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 TRMT1LQ7Z2T5 733 aaKnown RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 PSPC1Q8WXF1 523 aaKnown RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 DEFB118Q96PH6 123 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 MAP7D2Q96T17 732 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
SHMT2-210ENST00000553950 RNPEPQ9H4A4 650 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 PHF24Q9UPV7 400 aa16.06■□□□□ 0.16
SHMT2-210ENST00000553950 HTTP42858 3142 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 C17orf102A2RUQ5 167 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 TMEM150BA6NC51 233 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 ZBTB39O15060 712 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 C22orf31O95567 290 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 SMTNP53814 917 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-210ENST00000553950 KMT5BQ4FZB7 885 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-210ENST00000553950 IER5Q5VY09 327 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 GZF1Q9H116 711 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-210ENST00000553950 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
SHMT2-210ENST00000553950 TRIP12Q14669 1992 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-210ENST00000553950 IGKV6-21A0A0C4DH24 114 aa16.04■□□□□ 0.16
SHMT2-210ENST00000553950 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-210ENST00000553950 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
SHMT2-210ENST00000553950 ASAP2O43150 1006 aa16.04■□□□□ 0.16
SHMT2-210ENST00000553950 KLRC4O43908 158 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms