RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 FCRL3Q96P31 734 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 DSCC1Q9BVC3 393 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 MCOLN1Q9GZU1 580 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 CRTAC1Q9NQ79 661 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 SMC4Q9NTJ3 1288 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 AKT3Q9Y243 479 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 GPR55Q9Y2T6 319 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 TNRC6CQ9HCJ0 1690 aaKnown RBP5.85□□□□□ -1.47
ATXN3-220ENST00000553491 C10orf71Q711Q0 1435 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 NTSR2O95665 410 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 ENDOUP21128 410 aaKnown RBP5.85□□□□□ -1.47
ATXN3-220ENST00000553491 GRIA2P42262 883 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-220ENST00000553491 PPP2R5DQ14738 602 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 YOD1Q5VVQ6 348 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-220ENST00000553491 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 UBE3BQ7Z3V4 1068 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 C1QL4Q86Z23 238 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 TRIM59Q8IWR1 403 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 SIRT2Q8IXJ6 389 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 SSH1Q8WYL5 1049 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 PPP1R16BQ96T49 567 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 MCMBPQ9BTE3 642 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 RNF181Q9P0P0 153 aa5.85□□□□□ -1.47
ATXN3-220ENST00000553491 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-220ENST00000553491 A0A1W2PQ45 241 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 A0A1W2PQY0 241 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 NOP56O00567 594 aaKnown RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 FGF10O15520 208 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 PEX10O60683 326 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 PNLIPP16233 465 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 GLDCP23378 1020 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 L1CAMP32004 1257 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 RAP1GAPP47736 663 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 SLC10A5Q5PT55 438 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 EXOC2Q96KP1 924 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 JMJD8Q96S16 334 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 AARSD1Q9BTE6 412 aaKnown RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 GCM1Q9NP62 436 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 CD320Q9NPF0 282 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 ACSL6Q9UKU0 697 aa5.84□□□□□ -1.47
ATXN3-220ENST00000553491 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 DIS3Q9Y2L1 958 aaKnown RBP5.84□□□□□ -1.47
ATXN3-220ENST00000553491 AK9Q5TCS8 1911 aa5.84□□□□□ -1.48
ATXN3-220ENST00000553491 ATP10DQ9P241 1426 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 ABCC12Q96J65 1359 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 ZNF521Q96K83 1311 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 TRAV20A0A0B4J274 112 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 WTIPA6NIX2 430 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 PLIN1O60240 522 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 PDE8AO60658 829 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 BCAR3O75815 825 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 KCNH1O95259 989 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 PCCAP05165 728 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 IGKV5-2P06315 115 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 GSTM1P09488 218 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 CFPP27918 469 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 SF1Q15637 639 aaKnown RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 SLC14A2Q15849 920 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 PKN1Q16512 942 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 CCDC152Q4G0S7 254 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 TAF7LQ5H9L4 462 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 FAM209AQ5JX71 171 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 GTF2IRD2BQ6EKJ0 949 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 GTF2IRD2Q86UP8 949 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 BTN2A2Q8WVV5 523 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 ZDHHC15Q96MV8 337 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 CRAMP1Q96RY5 1269 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 ZNF277Q9NRM2 450 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-220ENST00000553491 MYH13Q9UKX3 1938 aa5.83□□□□□ -1.48
ATXN3-220ENST00000553491 TIAM2Q8IVF5 1701 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ADCY9O60503 1353 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 IPO8O15397 1037 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 PRODHO43272 600 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 BBOX1O75936 387 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 CLSTN1O94985 981 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ASMTLO95671 621 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms