RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC9A1P19634 815 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 APEX1P27695 318 aaKnown RBP6.83□□□□□ -1.32
ATXN3-217ENST00000553287 FNTBP49356 437 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 NFKB2Q00653 900 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
ATXN3-217ENST00000553287 ZNF568Q3ZCX4 644 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 ZMAT1Q5H9K5 638 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 GRAMD4Q6IC98 578 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 KIF18BQ86Y91 864 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 NIM1KQ8IY84 436 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 LRRC37BQ96QE4 947 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 LMF1Q96S06 567 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 ST6GALNAC2Q9UJ37 374 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 RAD54L2Q9Y4B4 1467 aa6.83□□□□□ -1.32
ATXN3-217ENST00000553287 POU3F2P20265 443 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-217ENST00000553287 PTX3P26022 381 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-217ENST00000553287 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 GPR20Q99678 358 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 FOXB1Q99853 325 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 ORAI3Q9BRQ5 295 aa6.82□□□□□ -1.32
ATXN3-217ENST00000553287 RSF1Q96T23 1441 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-217ENST00000553287 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
ATXN3-217ENST00000553287 CCDC88BA6NC98 1476 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 FAM83GA6ND36 823 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
ATXN3-217ENST00000553287 MEOX1P50221 254 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 RAC3P60763 192 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 ADAM17P78536 824 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 ROM1Q03395 351 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 ICAM4Q14773 271 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 DALRD3Q5D0E6 543 aaKnown RBP6.81□□□□□ -1.32
ATXN3-217ENST00000553287 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 RTKN2Q8IZC4 609 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-217ENST00000553287 MAML3Q96JK9 1138 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-217ENST00000553287 FEZ1Q99689 392 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 OXSMQ9NWU1 459 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 CLASP1Q7Z460 1538 aa6.81□□□□□ -1.32
ATXN3-217ENST00000553287 SNAPC4Q5SXM2 1469 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 GAS7O60861 476 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 F2P00734 622 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 RGS3P49796 1198 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 MRE11P49959 708 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 STAT5BP51692 787 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 PCBP1Q15365 356 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-217ENST00000553287 TBR1Q16650 682 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 NME9Q86XW9 330 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-217ENST00000553287 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 KIAA1683Q9H0B3 1180 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-217ENST00000553287 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
ATXN3-217ENST00000553287 ERCC6L2Q5T890 1561 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 DNMBPQ6XZF7 1577 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 UBA6A0AVT1 1052 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-217ENST00000553287 ZNF891A8MT65 544 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-217ENST00000553287 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 EPHA7Q15375 998 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 TTC38Q5R3I4 469 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 SLFN12LQ6IEE8 588 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-217ENST00000553287 AHI1Q8N157 1196 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 DNERQ8NFT8 737 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 C12orf65Q9H3J6 166 aaKnown RBP6.79□□□□□ -1.32
ATXN3-217ENST00000553287 MAGEL2Q9UJ55 1249 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 FAM184BQ9ULE4 1060 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 PLAAQ9Y263 795 aa6.79□□□□□ -1.32
ATXN3-217ENST00000553287 POLA1P09884 1462 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-217ENST00000553287 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 ZNF623O75123 536 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 PRLP01236 227 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 INSRRP14616 1297 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 CR2P20023 1033 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 SCNN1BP51168 640 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 ADCY1Q08828 1119 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 AGBL4Q5VU57 503 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 CREB3L3Q68CJ9 461 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms