RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 KRT76Q01546 638 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 NELL1Q92832 810 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 PCYT2Q99447 389 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 ELAC1Q9H777 363 aaKnown RBP13.6□□□□□ -0.23
SNRPF-205ENST00000553192 FBXO4Q9UKT5 387 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 ST3GAL5Q9UNP4 418 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 PCDHGA2Q9Y5H1 932 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
SNRPF-205ENST00000553192 KAT6AQ92794 2004 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 LOXHD1Q8IVV2 1947 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 DENND3A2RUS2 1198 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 GCOM1H8Y6P7 765 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-205ENST00000553192 STAM2O75886 525 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 CABP7Q86V35 215 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 GLG1Q92896 1179 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 CEP295Q9C0D2 2601 aa13.59□□□□□ -0.23
SNRPF-205ENST00000553192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
SNRPF-205ENST00000553192 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 PROS1P07225 676 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 KCNA2P16389 499 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 CA8P35219 290 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 STARD6P59095 220 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 HAND2P61296 217 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 SHC2P98077 582 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
SNRPF-205ENST00000553192 DSC3Q14574 896 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 SLC35G1Q2M3R5 365 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 TMEM173Q86WV6 379 aaPredicted RBP13.58□□□□□ -0.24
SNRPF-205ENST00000553192 LRRC43Q8N309 656 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 NETO1Q8TDF5 533 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
SNRPF-205ENST00000553192 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
SNRPF-205ENST00000553192 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-205ENST00000553192 SPEM2Q0P670 501 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 WTAPQ15007 396 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 PLCB4Q15147 1175 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 N4BP2L1Q5TBK1 243 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-205ENST00000553192 DCLRE1AQ6PJP8 1040 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 FAM43BQ6ZT52 329 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-205ENST00000553192 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 NME8Q8N427 588 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 MYADMQ96S97 322 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 SMARCAD1Q9H4L7 1026 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 SPATA6Q9NWH7 488 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-205ENST00000553192 ZSCAN32Q9NX65 697 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
SNRPF-205ENST00000553192 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-205ENST00000553192 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 CNOT1A5YKK6 2376 aaKnown RBP13.56□□□□□ -0.24
SNRPF-205ENST00000553192 SMIM35A0A1B0GVV1 85 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 ZBTB5O15062 677 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 LAMTOR5O43504 91 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
SNRPF-205ENST00000553192 CTSAP10619 480 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 METAP2P50579 478 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRPF-205ENST00000553192 NONOQ15233 471 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRPF-205ENST00000553192 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 CLLU1OSQ5K130 101 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 MIER1Q8N108 512 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 SLC2A4RGQ9NR83 387 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 NEDD4P46934 1319 aa13.56□□□□□ -0.24
SNRPF-205ENST00000553192 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 GPR182O15218 404 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 TBC1D4O60343 1298 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
SNRPF-205ENST00000553192 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
SNRPF-205ENST00000553192 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
SNRPF-205ENST00000553192 NXPE3Q969Y0 559 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 WDR6Q9NNW5 1121 aaKnown RBP13.55□□□□□ -0.24
SNRPF-205ENST00000553192 ZMIZ1Q9ULJ6 1067 aa13.55□□□□□ -0.24
SNRPF-205ENST00000553192 SOBPA7XYQ1 873 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 HOXA2O43364 376 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 GDF9O60383 454 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 CLCN4P51793 760 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 BCAR1P56945 870 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
SNRPF-205ENST00000553192 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
SNRPF-205ENST00000553192 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
SNRPF-205ENST00000553192 VN1R3Q9BXE9 311 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms