RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MTRQ99707 1265 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 GCOM2Q9BZD3 368 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 SCAND2PQ9GZW5 306 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 DHX33Q9H6R0 707 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 SUGCTQ9HAC7 445 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 ATP6V0A4Q9HBG4 840 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 BMP2KQ9NSY1 1161 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 DNAH12Q6ZR08 3092 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 ALPK3Q96L96 1907 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 VWA3AA6NCI4 1184 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 POTEMA6NI47 508 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 H0YCG3 227 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 SKIP12755 728 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 SFPQP23246 707 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 SMAD3P84022 425 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 ZNF200P98182 395 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 PAK2Q13177 524 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 RAB30Q15771 203 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 TMEM240Q5SV17 173 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 HYIQ5T013 277 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 CCDC73Q6ZRK6 1079 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 ANO5Q75V66 913 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 KIAA0319LQ8IZA0 1049 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 SLC17A8Q8NDX2 589 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 KIFAP3Q92845 792 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 IFT74Q96LB3 600 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 IFIH1Q9BYX4 1025 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 FAM49AQ9H0Q0 323 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 DACT1Q9NYF0 836 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 RGL1Q9NZL6 768 aa11.43□□□□□ -0.58
TRAFD1-208ENST00000552890 ZBTB42B2RXF5 422 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 SPTLC2O15270 562 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 DTNBO60941 627 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 RPS6KA5O75582 802 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 EYA4O95677 639 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 AMHP03971 560 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 STAG3L1P0CL83 205 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 EIF4BP23588 611 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 PHKA2P46019 1235 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 RARRES1P49788 294 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 PLEKHG4Q58EX7 1191 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 SRGAP1Q7Z6B7 1085 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 DHX38Q92620 1227 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 GJA10Q969M2 543 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 CTAGE1Q96RT6 745 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 NFKBIZQ9BYH8 718 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 CCSER1Q9C0I3 900 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 WNT8AQ9H1J5 351 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 C2orf40Q9H1Z8 148 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 CUEDC2Q9H467 287 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 CHST12Q9NRB3 414 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 C1orf112Q9NSG2 853 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 MSRAQ9UJ68 235 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 CDY2AQ9Y6F7 541 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 LOXHD1Q8IVV2 1947 aa11.42□□□□□ -0.58
TRAFD1-208ENST00000552890 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 HOXA2O43364 376 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 CUTAO60888 179 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 BRD1O95696 1058 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 SPATA31C1P0DKV0 1188 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 ZSCAN20P17040 1043 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 AXLP30530 894 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 EFNA5P52803 228 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 SMTNP53814 917 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 AMPD3Q01432 767 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 EMC2Q15006 297 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 UGCGQ16739 394 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 FBXO47Q5MNV8 452 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 TRMT1LQ7Z2T5 733 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 DEFB128Q7Z7B8 93 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 CABP7Q86V35 215 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 SCLYQ96I15 445 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 COL4A3BPQ9Y5P4 624 aa11.41□□□□□ -0.58
TRAFD1-208ENST00000552890 DENND3A2RUS2 1198 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 CHRNA1P02708 482 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 CTSHP09668 335 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 ATP2A2P16615 1042 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 CYP11B2P19099 503 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 ITGB8P26012 769 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 NLRP11P59045 1033 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 NBR1Q14596 966 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms