RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SLC15A5	A6NIM6	579 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	SH2B2	O14492	632 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	STRN	O43815	780 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	CPNE3	O75131	537 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZBED4	O75132	1171 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	DDAH1	O94760	285 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	HMGB1	P09429	215 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	HOXC6	P09630	235 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	PARP1	P09874	1014 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	GOLGA8H	P0CJ92	632 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	XRCC5	P13010	732 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	COPB2	P35606	906 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	SLC16A2	P36021	539 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	STAT3	P40763	770 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	LIFR	P42702	1097 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	PREP	P48147	710 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	EXOSC10	Q01780	885 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	GSTM4	Q03013	218 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ORC1	Q13415	861 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	SYDE2	Q5VT97	1194 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	WDR78	Q5VTH9	848 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	SGMS1	Q86VZ5	419 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	CCNJL	Q8IV13	435 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZNF654	Q8IZM8	581 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ABRA	Q8N0Z2	381 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	TMTC2	Q8N394	836 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	RAET1E	Q8TD07	263 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ARMC5	Q96C12	935 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZNF333	Q96JL9	665 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	FAM129B	Q96TA1	746 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	APBA2	Q99767	749 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	RANBP17	Q9H2T7	1088 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	KCNF1	Q9H3M0	494 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	RAVER2	Q9HCJ3	691 aa	Known RBP	7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	MAD2L2	Q9UI95	211 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	RIPK3	Q9Y572	518 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	IVNS1ABP	Q9Y6Y0	642 aa		7.73	□□□□□ -1.17
CNOT2-238	ENST00000552422	DOCK5	Q9H7D0	1870 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	WDR81	Q562E7	1941 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422		A0A096LPE4	126 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422		A0A1W2PPZ6	126 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	HYAL3	O43820	417 aa	Predicted RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	GAS2	O43903	313 aa	Known RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	ADCY3	O60266	1144 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	EIF5B	O60841	1220 aa	Known RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	IGLV1-40	P01703	118 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	ICAM1	P05362	532 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	ADORA2A	P29274	412 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	GRK4	P32298	578 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	RGS2	P41220	211 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	GRM4	Q14833	912 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	CATIP	Q7Z7H3	387 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	TRIM42	Q8IWZ5	723 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	CPXCR1	Q8N123	301 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	JAKMIP1	Q96N16	626 aa	Known RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	TCF12	Q99081	682 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	MAP3K14	Q99558	947 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	LRRC2	Q9BYS8	371 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	CPVL	Q9H3G5	476 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	C7orf69	Q9H7B7	122 aa		7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	CWC22	Q9HCG8	908 aa	Known RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.72	□□□□□ -1.17
CNOT2-238	ENST00000552422	RANBP2	P49792	3224 aa	Known RBP	7.71	□□□□□ -1.17
CNOT2-238	ENST00000552422	LOC100289279	A0A1B0GTE1	492 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	HMX2	A2RU54	273 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	MEGF11	A6BM72	1044 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CCDC69	A6NI79	296 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	KLRF2	D3W0D1	207 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	IGHA2	P01877	340 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	HMGCR	P04035	888 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	FCER1A	P12319	257 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CAST	P20810	708 aa	Known RBP	7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	RPS6KB1	P23443	525 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	PSMA5	P28066	241 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	GRIA4	P48058	902 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	ANAPC15	P60006	121 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	SNAP25	P60880	206 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	PCDH1	Q08174	1060 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	KCTD2	Q14681	263 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CDC37	Q16543	378 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	SPRED3	Q2MJR0	410 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	TKFC	Q3LXA3	575 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CCDC174	Q6PII3	467 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	APOA5	Q6Q788	366 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	BLOC1S2	Q6QNY1	142 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	FAM20C	Q8IXL6	584 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	ADGRF4	Q8IZF3	695 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	FBXL16	Q8N461	479 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	C12orf50	Q8NA57	414 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CHST13	Q8NET6	341 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	SH3TC2	Q8TF17	1288 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	TRIB2	Q92519	343 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	MTMR8	Q96EF0	704 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	IL17RA	Q96F46	866 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	TCEANC2	Q96MN5	208 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	MYL10	Q9BUA6	226 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	AGXT2	Q9BYV1	514 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	NPHS2	Q9NP85	383 aa		7.71	□□□□□ -1.18
CNOT2-238	ENST00000552422	HOMER2	Q9NSB8	354 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms