RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 SCN10AQ9Y5Y9 1956 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 NBNO60934 754 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 C22orf31O95567 290 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 CHRNA1P02708 482 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 CTSHP09668 335 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 MUTP22033 750 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 IGFBP4P22692 258 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 RPA1P27694 616 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 GPNMBQ14956 572 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 XKR9Q5GH70 373 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 KRT79Q5XKE5 535 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-225ENST00000551845 MAP7D2Q96T17 732 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 SH2D3AQ9BRG2 576 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 CELF4Q9BZC1 486 aaKnown RBP11.87□□□□□ -0.51
PTCH1-225ENST00000551845 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 ANKEF1Q9NU02 776 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-225ENST00000551845 MYH7BA7E2Y1 1941 aa11.87□□□□□ -0.51
PTCH1-225ENST00000551845 TMEM150BA6NC51 233 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 ZBTB39O15060 712 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 CXCL10P02778 98 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 NPEPPSP55786 919 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 MRPS6P82932 125 aaKnown RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 IKBKEQ14164 716 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 IL17AQ16552 155 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 SLC7A3Q8WY07 619 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 SEPT8Q92599 483 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 C1QTNF1Q9BXJ1 281 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-225ENST00000551845 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 TRPV2Q9Y5S1 764 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 CDY2AQ9Y6F7 541 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
PTCH1-225ENST00000551845 A0A087WWV3 80 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 ABHD14A-ACY1A0A1B0GW23 586 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 MED24O75448 989 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 PBX2P40425 430 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 RFC5P40937 340 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-225ENST00000551845 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
PTCH1-225ENST00000551845 ODR4Q5SWX8 454 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-225ENST00000551845 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 DBF4BQ8NFT6 615 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 FOXD4L4Q8WXT5 416 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-225ENST00000551845 AK8Q96MA6 479 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 CEP89Q96ST8 783 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 PBX4Q9BYU1 374 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-225ENST00000551845 KIAA1024Q9UPX6 916 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 CLIC4Q9Y696 253 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
PTCH1-225ENST00000551845 TTC28Q96AY4 2481 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 GRXCR1A8MXD5 290 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 EFCAB14O75071 495 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 DGAT1O75907 488 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 BAIAP3O94812 1187 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 F13A1P00488 732 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 CDC25AP30304 524 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 UBA7P41226 1012 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 CLCN3P51790 818 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 MGAT3Q09327 533 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 PLEKHG4Q58EX7 1191 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 KCTD17Q8N5Z5 321 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 TCP11Q8WWU5 503 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 APBB2Q92870 758 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms