RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 TELO2Q9Y4R8 837 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 RCCD1A6NED2 376 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 SPDYE5A6NIY4 337 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 IRF6O14896 467 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 TLR2O60603 784 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 CNMDO75829 334 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 STAM2O75886 525 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 LCA5LO95447 670 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 XRCC5P13010 732 aaKnown RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 PLS3P13797 630 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 KIF11P52732 1056 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 VAV2P52735 878 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 POLR2FP61218 127 aaKnown RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 PPATQ06203 517 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 ALCAMQ13740 583 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 ELF2Q15723 593 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 ASTE1Q2TB18 679 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 USP50Q70EL3 339 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 SIX2Q9NPC8 291 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 PLCB1Q9NQ66 1216 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
RAB5C-208ENST00000551338 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
RAB5C-208ENST00000551338 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SSU72P8A0A1W2PR75 194 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SPATA31C2B4DYI2 1134 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ZNF862O60290 1169 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SLC9A1P19634 815 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ICAM3P32942 547 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 EPHX2P34913 555 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 NCKAP1LP55160 1127 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 NPEPPSP55786 919 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 UTP14CQ5TAP6 766 aaKnown RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SFMBT2Q5VUG0 894 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 HS2ST1Q7LGA3 356 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SLC9A9Q8IVB4 645 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 SYN2Q92777 582 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 LACRTQ9GZZ8 138 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 NUCKS1Q9H1E3 243 aaKnown RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ST6GALNAC4Q9H4F1 302 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-208ENST00000551338 GUCA1BQ9UMX6 200 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 KCNH4Q9UQ05 1017 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 PCDHA10Q9Y5I2 948 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 PFASO15067 1338 aa12.62□□□□□ -0.39
RAB5C-208ENST00000551338 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CXCL11O14625 94 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 ACTN1P12814 892 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 PON1P27169 355 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CYP2J2P51589 502 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CYP27A1Q02318 531 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 FSTL1Q12841 308 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 MOGSQ13724 837 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 RAPGEF1Q13905 1077 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 ANO5Q75V66 913 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-208ENST00000551338 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 MNS1Q8NEH6 495 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 GOLGA5Q8TBA6 731 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 CCDC42Q96M95 316 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 ACCSQ96QU6 501 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 NAPGQ99747 312 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-208ENST00000551338 SPATC1LQ9H0A9 340 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-208ENST00000551338 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
RAB5C-208ENST00000551338 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms