RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 PARNO95453 639 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 RFC5P40937 340 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 POLGP54098 1239 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 MRPS6P82932 125 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 TMEM62Q0P6H9 643 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 FAM26DQ5JW98 314 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 IER5Q5VY09 327 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 TRAF7Q6Q0C0 670 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 DEFB128Q7Z7B8 93 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 RPUSD2Q8IZ73 545 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 SLC7A3Q8WY07 619 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 MAP7D2Q96T17 732 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 PLIN2Q99541 437 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 IL23AQ9NPF7 189 aa18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 DBR1Q9UK59 544 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-209ENST00000550872 IGKV6-21A0A0C4DH24 114 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 M0QZ92 97 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 CHRNA1P02708 482 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 ACRP10323 421 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 RFC2P35250 354 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 RARRES1P49788 294 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 DNM2P50570 870 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 KRT85P78386 507 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 LINC01465Q8N7H1 131 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 KCNG4Q8TDN1 519 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 CALML4Q96GE6 196 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 CHAMP1Q96JM3 812 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 PNMA5Q96PV4 448 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 NT5C3AQ9H0P0 336 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 DNM3Q9UQ16 869 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 AKT3Q9Y243 479 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 CDY2AQ9Y6F7 541 aa18.09■□□□□ 0.49
CHMP1A-209ENST00000550872 ARHGEF35A5YM69 484 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 E9PMD0 336 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 SLC26A4O43511 780 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 DGAT1O75907 488 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 VTNP04004 478 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 EPHB4P54760 987 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 GRB10Q13322 594 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 EMC2Q15006 297 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 HYIQ5T013 277 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 BHMT2Q9H2M3 363 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 RCOR1Q9UKL0 485 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 GINS2Q9Y248 185 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 TRPV2Q9Y5S1 764 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 SCN5AQ14524 2016 aa18.08■□□□□ 0.48
CHMP1A-209ENST00000550872 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 NBNO60934 754 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 EYA4O95677 639 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 BMP8BP34820 402 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 ME1P48163 572 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 MGAT3Q09327 533 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 MKRN4PQ13434 485 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 DRP2Q13474 957 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 MBTPS1Q14703 1052 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 GPNMBQ14956 572 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 USP49Q70CQ1 688 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 C16orf59Q7L2K0 433 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 KCTD17Q8N5Z5 321 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 SYMPKQ92797 1274 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 PPP1R16BQ96T49 567 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 MTRQ99707 1265 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 CCSER1Q9C0I3 900 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 ATP6V0A4Q9HBG4 840 aa18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-209ENST00000550872 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 CUTAO60888 179 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 FGBP02675 491 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 PFKMP08237 780 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 TXLNAP40222 546 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 NLRP11P59045 1033 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 KIZQ2M2Z5 673 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 TMEM119Q4V9L6 283 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 KCNK18Q7Z418 384 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 LEO1Q8WVC0 666 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 TCP11Q8WWU5 503 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 OSBPL7Q9BZF2 842 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 CDHR5Q9HBB8 845 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 CCDC39Q9UFE4 941 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 PCDHA7Q9UN72 937 aa18.06■□□□□ 0.48
CHMP1A-209ENST00000550872 CXCL10P02778 98 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 GHRP10912 638 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 TMEM240Q5SV17 173 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms