RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CSPP1Q1MSJ5 1256 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 PRR16Q569H4 304 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 BLOC1S2Q6QNY1 142 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 PHKBQ93100 1093 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 PPP1R16BQ96T49 567 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 GABBR1Q9UBS5 961 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 CEP131Q9UPN4 1083 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 PCDHB12Q9Y5F1 795 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 C5orf42Q9H799 3197 aa24.58■■□□□ 1.52
SMARCC2-210ENST00000550519 VTNP04004 478 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 DSC3Q14574 896 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 TRMT1LQ7Z2T5 733 aaKnown RBP24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 METTL13Q8N6R0 699 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 SMRP1Q8NCR6 262 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 RASGRP4Q8TDF6 673 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 ELAC1Q9H777 363 aaKnown RBP24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 AAASQ9NRG9 546 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 TMEM161AQ9NX61 479 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 PCDHGC5Q9Y5F6 944 aa24.57■■□□□ 1.52
SMARCC2-210ENST00000550519 MAGEB2O15479 319 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 EDIL3O43854 480 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 PPFIA3O75145 1194 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 GLP2RO95838 553 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 COASYQ13057 564 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 SPOUT1Q5T280 376 aaKnown RBP24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 RBM23Q86U06 439 aaKnown RBP24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 LINC01465Q8N7H1 131 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 BICD2Q8TD16 824 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 RNF26Q9BY78 433 aaPredicted RBP24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 TYW1Q9NV66 732 aaKnown RBP24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 TCEAL9Q9UHQ7 104 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 PIEZO1Q92508 2521 aa24.56■■□□□ 1.52
SMARCC2-210ENST00000550519 FGF18O76093 207 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 RPS6KB1P23443 525 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 CLCN3P51790 818 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 AKAP17AQ02040 695 aaKnown RBP24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 HERC4Q5GLZ8 1057 aaPredicted RBP24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 RNF135Q8IUD6 432 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 FAM167AQ96KS9 214 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 ATP6V0A4Q9HBG4 840 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 HCSTQ9UBK5 93 aa24.55■■□□□ 1.52
SMARCC2-210ENST00000550519 EVPLQ92817 2033 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 WDR64B1ANS9 1081 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 ZNF862O60290 1169 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 FGFR1P11362 822 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 IFNAR1P17181 557 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 COLGALT1Q8NBJ5 622 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 CCDC148Q8NFR7 591 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 ADAMTS10Q9H324 1103 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 CWH43Q9H720 699 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 TLE6Q9H808 572 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 TLR9Q9NR96 1032 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 MUTYHQ9UIF7 546 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 BARX2Q9UMQ3 279 aaPredicted RBP24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 SAMM50Q9Y512 469 aa24.54■■□□□ 1.52
SMARCC2-210ENST00000550519 MSH4O15457 936 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 EVCP57679 992 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 NLRP11P59045 1033 aaKnown RBP24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 EFCAB12Q6NXP0 572 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 ZNF710Q8N1W2 664 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 MICAL1Q8TDZ2 1067 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 DISC1Q9NRI5 854 aa24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 FNDC1Q4ZHG4 1894 aaPredicted RBP24.53■■□□□ 1.52
SMARCC2-210ENST00000550519 OATP04181 439 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 EIF4BP23588 611 aaKnown RBP24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 TMOD1P28289 359 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 USP11P51784 963 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 ERVFC1P60507 584 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 PDE12Q6L8Q7 609 aaKnown RBP24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 THNSL1Q8IYQ7 743 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 LRRC71Q8N4P6 559 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 MAP7D2Q96T17 732 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 RIT2Q99578 217 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 SLC26A6Q9BXS9 759 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 TMEM117Q9H0C3 514 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 NRBP2Q9NSY0 501 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 RNF19AQ9NV58 838 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 VPS54Q9P1Q0 977 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 AKT3Q9Y243 479 aa24.52■■□□□ 1.52
SMARCC2-210ENST00000550519 PLXNA4Q9HCM2 1894 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 FSCN2O14926 492 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 PER2O15055 1255 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 LAG3P18627 525 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 PDIA3P30101 505 aaKnown RBP24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 DUSP6Q16828 381 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 HFE2Q6ZVN8 426 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 CCDC136Q96JN2 1154 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 CASD1Q96PB1 797 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 CDCA3Q99618 268 aaPredicted RBP24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 SH3GLB2Q9NR46 395 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 LZTS1Q9Y250 596 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 USP15Q9Y4E8 981 aaPredicted RBP24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 TRIOO75962 3097 aa24.51■■□□□ 1.51
SMARCC2-210ENST00000550519 FSD2A1L4K1 749 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 LOC730098B7Z3J9 87 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 PSMA5P28066 241 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 PLCB3Q01970 1234 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 PRKCEQ02156 737 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 UGCGQ16739 394 aa24.5■■□□□ 1.51
SMARCC2-210ENST00000550519 LRRC55Q6ZSA7 311 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms