RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SP8Q8IXZ3 490 aa6.69□□□□□ -1.34
PFDN5-209ENST00000550069 IPO4Q8TEX9 1081 aaKnown RBP6.69□□□□□ -1.34
PFDN5-209ENST00000550069 FRS2Q8WU20 508 aa6.69□□□□□ -1.34
PFDN5-209ENST00000550069 NKX2-4Q9H2Z4 354 aa6.69□□□□□ -1.34
PFDN5-209ENST00000550069 RXFP1Q9HBX9 757 aa6.69□□□□□ -1.34
PFDN5-209ENST00000550069 HCFC2Q9Y5Z7 792 aa6.69□□□□□ -1.34
PFDN5-209ENST00000550069 COL11A2P13942 1736 aaPredicted RBP6.69□□□□□ -1.34
PFDN5-209ENST00000550069 CACNA1SQ13698 1873 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GRM8O00222 908 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 IRS4O14654 1257 aaPredicted RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 C8AP07357 584 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GNAI3P08754 354 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 NOP2P46087 812 aaKnown RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 SEPHS1P49903 392 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 RARSP54136 660 aaKnown RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GRAPQ13588 217 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 EEF1DP3Q658K8 133 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GALNT18Q6P9A2 607 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 SPATC1Q76KD6 591 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 EEPD1Q7L9B9 569 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 NPLOC4Q8TAT6 608 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 MYD88Q99836 296 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 SGPP1Q9BX95 441 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 RTFDC1Q9BY42 306 aaPredicted RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 MCOLN1Q9GZU1 580 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 EPB41L4BQ9H329 900 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 TNFRSF12AQ9NP84 129 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 SMC4Q9NTJ3 1288 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 GULP1Q9UBP9 304 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 MSRB2Q9Y3D2 182 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 R3HCC1Q9Y3T6 440 aaKnown RBP6.68□□□□□ -1.34
PFDN5-209ENST00000550069 ATP6V0A2Q9Y487 856 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 SCN4AP35499 1836 aa6.68□□□□□ -1.34
PFDN5-209ENST00000550069 A0A0G2JLW4 131 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 WTIPA6NIX2 430 aaPredicted RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 CSF1RP07333 972 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 HSP90AA1P07900 732 aaKnown RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 PNLIPP16233 465 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 SERINC3Q13530 473 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 SNX17Q15036 470 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 YOD1Q5VVQ6 348 aaPredicted RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 ATF7IPQ6VMQ6 1270 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 CYP2R1Q6VVX0 501 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 KREMEN2Q8NCW0 462 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 DPF3Q92784 378 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 C1orf159Q96HA4 380 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 EYA3Q99504 573 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 TRIM55Q9BYV6 548 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 SLC6A17Q9H1V8 727 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 TAOK3Q9H2K8 898 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 DCP1AQ9NPI6 582 aaPredicted RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 CRTAC1Q9NQ79 661 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 ARHGEF4Q9NR80 690 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 C9orf78Q9NZ63 289 aaPredicted RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 LRP2BPQ9P2M1 347 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 FBXL7Q9UJT9 491 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 RWDD3Q9Y3V2 267 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 TNRC6CQ9HCJ0 1690 aaKnown RBP6.67□□□□□ -1.34
PFDN5-209ENST00000550069 ZNF609O15014 1411 aa6.67□□□□□ -1.34
PFDN5-209ENST00000550069 FAM221BA6H8Z2 402 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ANXA1P04083 346 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 IGKV5-2P06315 115 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 NAT2P11245 290 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ENDOUP21128 410 aaKnown RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 GPTP24298 496 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ANP32AP39687 249 aaKnown RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ECI1P42126 302 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 PIP4K2AP48426 406 aaPredicted RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 CTSWP56202 376 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 RPS8P62241 208 aaKnown RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 CYP4F8P98187 520 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 RABL6Q3YEC7 729 aaPredicted RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 HLA-DQA1Q5Y7H0 255 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 JAMLQ86YT9 394 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 IRF2BP1Q8IU81 584 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ANKRD18AQ8IVF6 992 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 CKAP2LQ8IYA6 745 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 TMEM145Q8NBT3 493 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ZNF622Q969S3 477 aaKnown RBP eCLIP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 DNAJC2Q99543 621 aaKnown RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ANKRD2Q9GZV1 360 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 NAP1L2Q9ULW6 460 aaPredicted RBP6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ABCC4O15439 1325 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 KDM2BQ8NHM5 1336 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 PSME4Q14997 1843 aa6.66□□□□□ -1.34
PFDN5-209ENST00000550069 ANKRD18BA2A2Z9 1011 aa6.65□□□□□ -1.34
PFDN5-209ENST00000550069 C7orf72A4D263 438 aa6.65□□□□□ -1.34
PFDN5-209ENST00000550069 NUDT19A8MXV4 375 aa6.65□□□□□ -1.34
PFDN5-209ENST00000550069 FARP2O94887 1054 aaPredicted RBP6.65□□□□□ -1.34
PFDN5-209ENST00000550069 SNRPB2P08579 225 aaKnown RBP6.65□□□□□ -1.34
PFDN5-209ENST00000550069 LCP1P13796 627 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms