RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 LMCD1Q9NZU5 365 aa17.98■□□□□ 0.47
COX6A1-203ENST00000550009 RAPGEFL1Q9UHV5 662 aa17.98■□□□□ 0.47
COX6A1-203ENST00000550009 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
COX6A1-203ENST00000550009 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.97■□□□□ 0.47
COX6A1-203ENST00000550009 JAK2O60674 1132 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 RPS6KA5O75582 802 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 OATP04181 439 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 CYP3A7P24462 503 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 BMPR1AP36894 532 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 NR5A1Q13285 461 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 LETM2Q2VYF4 491 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 NME8Q8N427 588 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 BANK1Q8NDB2 785 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 CLP1Q92989 425 aaKnown RBP17.97■□□□□ 0.47
COX6A1-203ENST00000550009 ADAM2Q99965 735 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 ADAMTS10Q9H324 1103 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 UBE2ZQ9H832 354 aaPredicted RBP17.97■□□□□ 0.47
COX6A1-203ENST00000550009 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
COX6A1-203ENST00000550009 SQORQ9Y6N5 450 aa17.97■□□□□ 0.47
COX6A1-203ENST00000550009 H3BQ06 376 aaPredicted RBP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 KCNA5P22460 613 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 NLRP11P59045 1033 aaKnown RBP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 NONOQ15233 471 aaKnown RBP eCLIP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 MTERF2Q49AM1 385 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 PLA2G4FQ68DD2 849 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 MIER3Q7Z3K6 550 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 NPAS4Q8IUM7 802 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 ZNF579Q8NAF0 562 aaKnown RBP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 RIT2Q99578 217 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 ORC3Q9UBD5 711 aaPredicted RBP17.96■□□□□ 0.47
COX6A1-203ENST00000550009 TCEAL9Q9UHQ7 104 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 COG5Q9UP83 839 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 AKT3Q9Y243 479 aa17.96■□□□□ 0.47
COX6A1-203ENST00000550009 C9IYK1 514 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 C5orf67F2Z3F1 127 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 FGFR1P11362 822 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 DSC3Q14574 896 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 TARBP2Q15633 366 aaKnown RBP17.95■□□□□ 0.46
COX6A1-203ENST00000550009 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 HAS1Q92839 578 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
COX6A1-203ENST00000550009 RNF19AQ9NV58 838 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 SEPT9Q9UHD8 586 aaPredicted RBP17.95■□□□□ 0.46
COX6A1-203ENST00000550009 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
COX6A1-203ENST00000550009 VAV3Q9UKW4 847 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
COX6A1-203ENST00000550009 LINC01565O15544 149 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 ITGB1P05556 798 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 IL9P15248 144 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 IRS1P35568 1242 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
COX6A1-203ENST00000550009 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
COX6A1-203ENST00000550009 DLX2Q07687 328 aaPredicted RBP17.94■□□□□ 0.46
COX6A1-203ENST00000550009 ADGRD2Q7Z7M1 963 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 RGS18Q9NS28 235 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 PLAGL2Q9UPG8 496 aa17.94■□□□□ 0.46
COX6A1-203ENST00000550009 ZBTB39O15060 712 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 LTBRP36941 435 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 ANAPC15P60006 121 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 HYAL1Q12794 435 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
COX6A1-203ENST00000550009 EP400NLQ6ZTU2 488 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 KSR1Q8IVT5 923 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 KLHL23Q8NBE8 558 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
COX6A1-203ENST00000550009 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
COX6A1-203ENST00000550009 CCDC194A0A1B0GVG4 234 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 DENND3A2RUS2 1198 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 TBKBP1A7MCY6 615 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 GPC3P51654 580 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 NEK4P51957 841 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 JAK3P52333 1124 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 NPEPPSP55786 919 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 CLUL1Q15846 466 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 LRRC55Q6ZSA7 311 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 ANO5Q75V66 913 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 NEK8Q86SG6 692 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 CMTR2Q8IYT2 770 aaKnown RBP17.92■□□□□ 0.46
COX6A1-203ENST00000550009 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 FAM167AQ96KS9 214 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 KCNMB3Q9NPA1 279 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 NRBP2Q9NSY0 501 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
COX6A1-203ENST00000550009 LRFN2Q9ULH4 789 aa17.92■□□□□ 0.46
COX6A1-203ENST00000550009 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
COX6A1-203ENST00000550009 CCNT1O60563 726 aaKnown RBP17.91■□□□□ 0.46
COX6A1-203ENST00000550009 RPLP2P05387 115 aaKnown RBP17.91■□□□□ 0.46
COX6A1-203ENST00000550009 SFNP31947 248 aa17.91■□□□□ 0.46
COX6A1-203ENST00000550009 PBX3P40426 434 aa17.91■□□□□ 0.46
COX6A1-203ENST00000550009 PTPROQ16827 1216 aa17.91■□□□□ 0.46
COX6A1-203ENST00000550009 AAK1Q2M2I8 961 aa17.91■□□□□ 0.46
COX6A1-203ENST00000550009 GALNT17Q6IS24 598 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms